Candidatus Methanosuratincola verstraetei: ACO0C9_06910
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Entry
ACO0C9_06910 CDS
T10956
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mvj Candidatus Methanosuratincola verstraetei
Pathway
mvj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ACO0C9_06910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvj03019
]
ACO0C9_06910
03009 Ribosome biogenesis [BR:
mvj03009
]
ACO0C9_06910
04131 Membrane trafficking [BR:
mvj04131
]
ACO0C9_06910
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvj04147
]
ACO0C9_06910
Messenger RNA biogenesis [BR:
mvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ACO0C9_06910
Ribosome biogenesis [BR:
mvj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ACO0C9_06910
Membrane trafficking [BR:
mvj04131
]
SNARE
SNARE associated proteins
Others
ACO0C9_06910
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ACO0C9_06910
Exosome [BR:
mvj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACO0C9_06910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_2
AAA_16
AAA_5
AAA_14
AAA_33
TIP49
AAA_22
Vps4_C
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_28
ATPase_2
nSTAND3
AAA_24
AAA_lid_PRS2_C
Zeta_toxin
IstB_IS21
ATPase
AAA_17
ABC_tran
Sigma54_activat
DUF815
AAA_7
AAA_18
NB-ARC
Parvo_NS1
AAA_3
PhoH
Rad17
SLFN-g3_helicase
Bac_DnaA
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
XRH75217
LinkDB
All DBs
Position
1240476..1242635
Genome browser
AA seq
719 aa
AA seq
DB search
MTENRSLELEVAEARTRDVGRALARLNRQAMSRLGLRPGDFIEVEGKRRTVAIAWPAYAE
DEDHDIIRIDGIIRHNTGTSIGDTVKVSKADLKPASKIVLAPTEPIRFSSDFGEYVRQIL
EDKPLSKGDTVMVPILGEALRLVVASIQPEQSGYVTEDSEVIVKEEPVKEIDTSRPKVSY
EDIGGLADAKEKIREMIELPMRHPELFKHLGIEPPKGVLMYGPPGCGKTLLAKAVANESG
ANFITINGPEIMSKFYGESEQKLREIFEEAEKNAPSIIFIDEIDSIAPKREEVSGEVERR
VVAQLLALMDGLKSRGQVIVIAATNRPDAIDPALRRPGRFDRELAISMPDKKGRQEILQV
HVRGMPLSEDVKIDEIAGMTHGYSGADLAALTREAAMRALRRFLPKLDLQKQTIPASILN
SLKVSKADFLEAMKDITPSALREVYVEVPEVHWEDVGGLADVKRQLQEMVEWPLKHPELF
EQMGIEPPKGILLYGPPGTGKTLLAKAAATESQANFISVKGPEVLSKWVGESEKAIREIF
KKARQAAPCIVFFDELDSIAPRRGGHTDSGVTERMVNQILSEMDGLVSLKNVVVIGATNR
PELIDPALLRPGRFDRSVYIPIPDRAAREEIFKVHTKKMPLDEGVDLKVLAEKTEGYTGA
DIAAVCREAALSALREDMKPKKIQMKHFEAALKAIQPSVSKEDLLRYDDSKKMLGKMFV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaacagatcattagagctagaagttgccgaggcgcgcacccgagatgtgggt
cgtgccttggccaggctgaaccgccaggcgatgagcaggcttggcctgcggcctggcgac
ttcatcgaagtggaggggaagcggcggaccgtagccatagcttggcccgcttacgctgag
gacgaggatcacgacataataaggatagacgggataataaggcacaatactgggacctct
ataggcgacaccgtgaaggtctccaaggccgatcttaagcctgcttcaaagattgtgctc
gccccgactgagccgataaggttcagctctgacttcggggagtatgtgaggcagatcctg
gaagacaagccgctgagcaagggagatactgtgatggtgccgatccttggcgaagccctt
cggctggtagtggcctcgatccagcccgaacaatccggatacgtcacggaggattcggag
gtaatcgtgaaggaggagccggtcaaggagatcgatacctccaggccaaaggtatcctac
gaggacataggggggctcgcggacgcaaaagagaagataagggagatgatcgagctcccg
atgcgccaccccgagctcttcaagcacctcggcatcgagccgccgaagggggtgctgatg
tacggaccgcccgggtgcggcaagacgctcctcgcaaaggcagtggcaaatgaatccggt
gccaacttcatcacaatcaacggccccgagatcatgagcaagttctacggcgagtcggag
cagaagctcagggagatctttgaggaggccgagaagaacgccccaagcatcatattcata
gacgagatcgactcgatcgcccccaagagggaggaagtatcgggcgaggtcgagaggagg
gtcgtggcccagctactcgcactcatggacgggctcaagagcagggggcaggtcattgtg
atcgcagccaccaaccgtccagacgcgatagaccctgccctgaggaggcccggcaggttc
gaccgcgagcttgccatctcgatgcccgacaagaaggggaggcaggagatcctccaggtc
catgttagaggcatgccgctgagcgaggacgtcaagatagacgagattgcggggatgaca
cacggctacagcggcgcagacctggcggcgctcacaagggaggctgcgatgcgggcgctg
aggagattcctgccgaagcttgacctccagaagcagacgatacccgcctcgatcctgaac
tcgctgaaggtatccaaggctgacttccttgaggcgatgaaagacataactccctcggcg
ctccgggaggtatacgtcgaggtcccggaggtccactgggaagatgtcggcggcctcgca
gacgtgaagaggcagctgcaggagatggtagagtggcccctgaagcaccccgagctattc
gagcagatgggaatcgagccgccgaaggggatcctgctctacggaccgcctggcacgggc
aagacgctcctcgcgaaggctgctgccaccgagagccaagccaacttcatcagcgtaaag
ggacccgaggtcctgagcaagtgggtcggcgagtcagagaaggcgatcagggagatcttc
aagaaggcaaggcaggctgcgccgtgcatagtcttcttcgacgagcttgactcgatcgct
ccgaggaggggcgggcataccgactcaggcgtaaccgagaggatggtcaaccagatccta
tcggagatggacgggctggtctccctcaagaatgtcgtggtcatcggtgcgaccaacagg
ccagagctcatcgaccccgccctgctcaggccagggcgctttgacagatccgtatacata
cccatacctgaccgggcagcgagggaggagatcttcaaggtgcacacgaagaagatgcca
ctggatgagggcgtcgacctgaaggtcttggctgagaagaccgagggctacactggcgcc
gacatcgctgcggtgtgccgcgaggctgcgctgagcgccctcagggaggacatgaaaccg
aagaagatacagatgaagcacttcgaggctgccctcaaggcaatacagccgagcgtctcc
aaggaggatctgctcaggtacgacgactcgaaaaagatgctagggaaaatgttcgtctga
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