Candidatus Methanosuratincola verstraetei: ACO0C9_07230
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Entry
ACO0C9_07230 CDS
T10956
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mvj Candidatus Methanosuratincola verstraetei
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvj03016
]
ACO0C9_07230 (endA)
Enzymes [BR:
mvj01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
ACO0C9_07230 (endA)
Transfer RNA biogenesis [BR:
mvj03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
ACO0C9_07230 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
XRH75280
LinkDB
All DBs
Position
1296544..1297098
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AA seq
184 aa
AA seq
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MASSLPVATIIGSRIIVLSKTQGAKLYKEGFFGKPVNIHKPKDTEVDAPLELSLFEANYL
LEQRRISVESGGRAISLEELAKFSRENFRLFDELYAVYKDLREKGYVVRPGMKFGSDFAV
YEYGPGIDHAPFVIHVLPSSAEVDPIEIVRAGRLSHTVRKKFILATLDRSRNKVLYFMFM
WWKA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctccctgccagtggcaacaataatcggatcccggatcatcgtactctcaaaa
actcaaggggcaaagctctacaaggagggctttttcggcaaaccggtcaacatccacaag
ccaaaggacacagaggtcgatgccccgctcgagctatcgctcttcgaagcaaactacctc
ctagagcaaaggcggatatccgtcgagtcggggggccgtgctatttcactagaggaactg
gcgaagttctcgagggagaatttcaggctttttgacgagctctatgcggtttacaaagac
cttcgcgagaaggggtatgtcgttaggccagggatgaaattcggatctgatttcgcggtt
tacgaatatggcccaggcatcgaccatgccccgttcgtcatacatgtgctcccaagctcg
gcagaggtagacccaatagagatagtgagggcagggcgcctctcacataccgtgaggaag
aagttcatactcgccacccttgacaggtcccggaacaaggtgctttacttcatgttcatg
tggtggaaggcttag
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