Mycolicibacter virginiensis: MJO54_03810
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Entry
MJO54_03810 CDS
T08150
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mvm
Mycolicibacter virginiensis
Pathway
mvm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MJO54_03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvm03021
]
MJO54_03810
03400 DNA repair and recombination proteins [BR:
mvm03400
]
MJO54_03810
Enzymes [BR:
mvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MJO54_03810
Transcription machinery [BR:
mvm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MJO54_03810
DNA repair and recombination proteins [BR:
mvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MJO54_03810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ULP48291
LinkDB
All DBs
Position
777499..781449
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDTDMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADVRRKVRDGGEREMRQLRDRAQRELDRLDNIWDTFVKLAPKQLIVDETV
YRELVDRYGEYFTGAMGAESIQKLIETFDIDAEAELLRDIIKNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEIEGDTGEYT
PAAKDRPETGVYSSPAEAIMAVDRGALSVRAKIKVRLDQLRPPAEVETELFGENGWRPGG
SWIAETTLGRVLFNELLPTGYPFVNKQMHKKVQAVIINDLAERYPMIVVAQTVDKLKDAG
FHWATRSGVTVSMADVLVPPRKKEILDSYEERADKLEKQFQRGALNREERNEALVEIWKE
ATEEVGQALRDHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGIIVD
LAEAQADGSLIRNAFIETSAYARTLAVDAVDEKGKVVIERGHDLGDPSIEALLAAGITSV
KVRSVLTCATGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GDDITGGLPRVQELFEARIPRGKAPIADVAGRVQLEEGEKFYKITIVPDDGGEEVVYDKL
PKRQRLRVFKHEDGSERLLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVNEVQQ
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFETANRRVVAEGLEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPA
GTGINRYRNIAVQPTEEARAAAYTIPSYEDQYYSPDFGAATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccgcatcggcctggcgaccgcggaggacatc
cggcaatggtcttacggtgaggtcaagaagccggaaacgatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgactcgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgctccg
gtcacccacatctggtacttcaagggcgtgccgtcgcgcttgggctacctgctggacctg
gcgcccaaggacctcgaaaagatcatctacttcgcggcctacgtgatcaccagcgtcgac
accgacatgcgtcacaacgagctgtccacgctggaagccgagatggtcgtcgagaagaag
gccgtcgaggaccagcgggacgccgacctggaggcccgcgcccagaagctcgaggccgac
ctggccgagctggaggccgagggtgcgaaagccgatgtgcgccgcaaggttcgcgacggc
ggcgagcgtgagatgcgtcagctgcgcgaccgtgcccagcgtgagctggaccgcctcgac
aacatctgggacaccttcgtcaagctggctcccaagcagctgatcgtcgacgagaccgtc
taccgcgagctggtggaccgttacggcgagtacttcaccggtgccatgggtgccgagtcg
atccagaagctcatcgagaccttcgacatcgacgccgaggccgagctgctgcgcgacatc
atcaagaacggcaaggggcagaagaagcttcgtgctctcaagcgcctcaaggtggtcgcc
gccttccagcagtcgggtaactccccgatgggcatggtgctcgacgcggtgccggtgatc
ccgccggagctgcgtccgatggtgcagctcgacggtggtcgcttcgcgacctccgacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccggttgaagcgtctgatcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgtcgcggccggccggtcaccggaccgggcaaccgtccgctgaag
tcgttgagcgacctgctcaagggcaagcagggccggttccgtcagaacctgctcggtaag
cgtgtcgactactcgggccgttcggtgatcgtggtcggtccgcagctcaagctgcaccag
tgcggcctgcccaagctgatggcgctggaactgttcaagccgttcgtgatgaagcgactg
gttgacctcaaccacgcgcagaacatcaagagcgccaagcggatggtggagcggcagcgc
ccccaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctcaaccgt
gcacccacgctgcaccgcctgggtattcaggccttcgagccgcagctggtggaaggcaag
gccattcagctgcacccgctggtgtgtgaggccttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgagcgccgaggcgcaggccgaggcccgcatcctgatgctg
tcgagcaacaacatcctgtcgccggcctcgggtcgtccgctggccatgccccgactggac
atggttaccggtctgtactacctgaccaccgagatcgagggtgacacaggcgaatacacc
ccggctgccaaggaccgcccggagaccggcgtgtactcctcgccggccgaggcgatcatg
gccgtcgaccgcggtgcgctttccgtgcgggccaagatcaaggtgcgtctggaccagctg
cggccgccggccgaggtggagaccgagctgttcggcgagaacggctggcgtccgggcggg
tcctggatcgccgagaccaccctgggccgggtgctgttcaacgagctgctgccgaccggc
tacccgttcgtgaacaagcagatgcacaagaaggttcaggccgtcatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcccagaccgtcgacaagctcaaggacgccggc
ttccactgggccacccgttcgggagtcacggtctcgatggccgacgtgctggtgccgccg
cgcaagaaggagatcctcgactcctacgaggagcgtgccgacaagctggagaagcagttc
cagcgtggcgcgctcaaccgcgaagagcgcaatgaggcgctggtggagatctggaaggaa
gccaccgaggaagtgggtcaggcgctgcgtgaccactacccggccgacaacccgatcatc
acgatcgtcgactccggtgctacgggtaacttcacccagacccggacgctggccggcatg
aagggtctggtgaccaacccgaagggtgagttcatcccgcgcccgatcaagtcctccttc
cgtgagggcctgacggtgttggagtacttcatcaacacccacggcgcccgaaagggattg
gcggacaccgcgctgcgtaccgctgactcgggttacctgacgcgtcgtctggtcgacgtt
tcgcaggacgtgatcgtgcgcgagcacgactgcggcaccgagcgcggcatcatcgtcgac
ttggccgaggcccaggccgacggatcgctgatccgcaacgcgttcatcgagacgtctgcc
tacgcccgcacgttggccgttgacgcggtcgacgagaagggcaaggtcgtcatcgagcgc
ggtcacgacctcggcgacccgtcgatcgaggctctgctggctgccggcatcacaagcgtc
aaggtgcgttcggtgctgacctgcgccaccggaaccggggtttgcgccacctgctacggc
cgatcgatggccaccggcaagctggtcgacatcggtgaggcggtcggcatcgttgccgcc
cagtccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggtgtc
ggtgacgacatcaccggtggtctgccgcgtgtgcaggagctgttcgaggcccggattccg
cgtggcaaggcgccgatcgccgacgtcgctggacgggtgcagctcgaagagggcgagaag
ttctacaagatcacgatcgtgccggatgacggtggcgaggaagtggtctacgacaagctg
cccaagcgtcagcggctgcgtgtgttcaagcacgaggacggctcggagcggttgctgtcc
gacggcgaccacgtcgaggtcggccagcagctcatggagggttcggccgacccgcacgag
gtgctgcgtgtgcagggcccgcgtgaggtgcagatccacctcgtcaacgaggtccagcag
gtctaccgcgcccagggtgtgtcgatccacgacaagcacatcgaggtgatcgtccggcag
atgctgcgccgggtgaccatcatcgactcgggcgccacggagttcctgcccggttcgctg
accgagcgcgccgagttcgagaccgcgaaccgtcgtgtggtggccgagggcctggagccc
gcggccggacgtccggtgctgatgggtatcaccaaggcgtcgctggccaccgactcgtgg
ctgtcggcggcttccttccaggagaccacccgcgtgcttaccgatgcggcgatcaactgc
cgcagcgacaagctgcagggcctgaaggagaacgtgatcatcggcaagctgatcccggcc
ggcaccggcatcaaccggtaccgcaacatcgccgtgcagcccaccgaagaggcccgggcc
gctgcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggcgccgcc
accggtgccgcggttccgctggacgactacgggtacagcgactaccgctag
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