Mycolicibacter virginiensis: MJO54_06895
Help
Entry
MJO54_06895 CDS
T08150
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mvm
Mycolicibacter virginiensis
Pathway
mvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJO54_06895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvm03019
]
MJO54_06895
03009 Ribosome biogenesis [BR:
mvm03009
]
MJO54_06895
Enzymes [BR:
mvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MJO54_06895
Messenger RNA biogenesis [BR:
mvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MJO54_06895
Ribosome biogenesis [BR:
mvm03009
]
Prokaryotic type
rRNA helicases
MJO54_06895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
UvrA_inter
CMS1
HEM4
Cas3-like_C_2
adh_short
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ULP48812
LinkDB
All DBs
Position
1394448..1396199
Genome browser
AA seq
583 aa
AA seq
DB search
MTSPDAPAEPFPDTTGSLVDPPTPTFADLQIHPSVLKAVADVGYETPSAIQAATIPALLE
GSDVVGLAQTGTGKTAAFAIPILSRIDTTSKATQALVLAPTRELALQVAEAFGRYGAHLP
RINVLPIYGGASYTVQLSGLKRGAQVVVGTPGRVIDHLERGSLDLSHLDYLVLDEADEML
QMGFAEDVERILADTPEYKQVALFSATMPSAIRRITSRYLHDPVEVTVKAKTTTAENISQ
RYIEVAGPRKMDALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIAQA
QRERTITALKNGNIDILVATDVAARGLDVDRISHVVNYDIPNDPEAYVHRIGRTGRAGRS
GTALLFVNPRERHLLRLIEKVTRQKLIESELPSVEDVNAQRVAKFADAITNHLGASGIEL
FRRLVEDYSREHNVPMADIAAALALQSRDGEAFLMVEPPPDKRRERAKPDRDGGRDDRKG
DRKGPPKDGFATYRISVGKRHKVNPGAIVGALANEGGLHRSDFGSISIKVDHSLVELPAK
LSGKTFKALEQTRIQGQLINLRRERPSGKPDRRGEGGYRKRTE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgcctgatgcccccgctgagccgttcccggacaccactggttccctcgttgac
ccgcccaccccaactttcgctgacctgcagatccacccctcggtgctgaaggccgtcgcc
gacgtcggttatgagacgccctcggcgattcaggccgccaccattccggccttgctggag
ggttccgacgtggtcgggctggcccagaccggcaccggcaagaccgccgcgttcgcgatt
ccgatcctgtcccgcatcgacaccacgagcaaagccacccaggcgctggtgctcgcgcca
acccgcgagttggcgctgcaggtcgccgaggcgttcgggcgctacggtgcgcatctgcct
cggatcaatgtgctgccgatctacggcggcgcttcctacaccgtgcagctgtcgggtctg
aagcgcggcgcgcaggtcgtggtcggtactccgggccgggtcatcgatcacctggaacgc
ggcagcttggacttgtcgcacctggattacctggtgctcgacgaggccgatgagatgctg
cagatgggattcgccgaagacgtcgaacgcatcctggcggacacccccgagtacaagcag
gtggcgctgttctcggcgaccatgccctcggcgattcgccgcatcaccagccgttacctg
cacgaccccgtcgaagtcaccgtcaaggccaaaaccaccacggcggagaacatctcgcag
cgctacatcgaggtcgccgggccgcgaaagatggacgccctgactcgggtgctcgaagtc
gaacccttcgaagcgatgatcgtcttcgtccgcaccaagcaggccaccgaagaggttgcc
gaaaagttgcgtgcccgaggattttccgcggcggcgatcaatggtgacatcgcgcaggcg
cagcgggaacggaccatcaccgccctgaagaacggcaacatcgacatcttggtcgccacc
gatgtcgccgcccgcggactggatgtggaccggatctcccatgtcgtcaactacgacatt
cccaacgaccccgaggcttatgtgcaccggatcgggcgcaccggacgagccggacgctcg
ggaaccgcgctgctgttcgtcaacccgcgggaacgccacctgctgcggctgatcgagaag
gtgactcggcagaagctgatcgagtccgagctgcccagcgtcgaggacgtcaatgcacag
cgggtggccaagttcgccgacgcgatcaccaaccacctcggtgcgtcgggcatcgaattg
ttccggcgcttggtcgaggactacagccgcgagcacaacgtgccgatggccgacattgcc
gccgcactggccctgcagtcccgcgacggcgaggcgttcctgatggtggaaccgccgccg
gacaagcgacgcgaacgcgccaagccggaccgcgacggcggacgagacgaccgcaaaggc
gaccgcaaaggcccgccgaaagacggattcgccacctaccggatctcggtcggcaagcgc
cacaaggtcaaccccggtgcgatcgtcggggcactggccaacgagggtggactgcaccgc
agtgatttcggcagcatcagcatcaaggtggaccactcgctggtcgagttgcccgccaaa
ctatccggcaagaccttcaaggcgttggagcagaccaggattcagggtcagctgatcaac
ctgcgtcgcgaacggccgtctggtaaacccgatcggcgcggcgagggcgggtaccggaaa
cggaccgaatga
DBGET
integrated database retrieval system
