Mycolicibacter virginiensis: MJO54_16610
Help
Entry
MJO54_16610 CDS
T08150
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvm
Mycolicibacter virginiensis
Pathway
mvm03420
Nucleotide excision repair
mvm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MJO54_16610
03430 Mismatch repair
MJO54_16610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvm03400
]
MJO54_16610
Enzymes [BR:
mvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MJO54_16610
DNA repair and recombination proteins [BR:
mvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJO54_16610
MMR (mismatch excision repair)
Other MMR factors
MJO54_16610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ULP46437
LinkDB
All DBs
Position
complement(3431384..3434896)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSGRYDPAELAAALGLHQPTEEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
ADPGQVLGLTFTRKAAGQLLRRVRSRLARLAGAGLMAAEPDRSGAKGIDGATATTPVVST
YHAFAGALLREHGLLLGIEPDTRLLTETGLWQLAFDVVSGYPGELDTDRDPAAVTAMVLR
LAGQLAEHLVDTDALRHTHLELERLVHTLPPGPRQRAEPNQSLLKMLDTQTERAELVPLI
EALHQRMRAERAMDFGAQMATAARLAESNEAVGARLRATYRVVLLDEYQDTGHAQRIALS
SLFGGGVDDDLALTAVGDPIQSIYGWRGASATNLPRFATDFPLSDGSPAPTLELRTSWRN
PPEVLHLANEISAEARRRSVTVQSLRPRPAAPPGDVRVALLPDVVTEDEWVAEALQRCYR
QADADGVDPPTAAVLVRRNADAAPLAEAIRARGVPVEVVGLAGLLSVPEVADLVAMLRLI
QEPTAGAAAMRVLTGPRWRFGAADLAALWRRAAELARPEQSGAPVSAAEIAATAGPDSET
ACLADALADPGPAERYSAVGYRRIVALAEELTLLRGHLWHPLPDLVAEVRRVLGLDCEVL
AAQPVAASAAGTEQLDAFADVVAGYAEGAGAQAALPGLLAYLDAAAVVENGLAPAAPAVA
ADRVQILTVHAAKGLEWQVVAIPHLVARVFPSTASRRSWLSDASELPPLLRGDRAQPFGP
GGSARFDGGEAKLGPRHEPGGSARFDGGEAKLGPPHEPGGSARFDGGEAKLGPPHEPGGS
ARFDGGEAKLGPPHEPGDHGVPLLDTDAVTNRKQLSDAISEHQRRLDQRRVDEERRLLYV
AVTRAEDTLLISGHHWGQGEAKPRGPSDFLAEIKAVIDSSADEGTPCGTVEHWAQAPADG
EKNPLCDTANEGVWPADPLDGRRGDVERGAALVAAKLQAGEPQDDTPSASRWAADVDALL
AERATAATQQTRTLPNQLSVSGLVELSRDPDGAGQRLSRRLPARPDPHALLGTAFHDWVQ
RLYGAERLFELEDLPGAADADTARADAQELARLQAAFLESPWAARTPTAVEVPFEMVIGS
RVVRGRIDAVFVERDGGVTVVDWKTGTPPDGPDARRHAAVQLGVYRLAWAALTGCPASQV
RAAFHYVRSGTTVIADELPELADLAALLNA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgctacgaccccgccgaactggcggccgcgcttgggttgcaccagcccacc
gaggagcaggccgcggtcatcgccgccccgccggggccgctggtggtgattgccggtgcg
ggtgccggtaagaccgagacgatggccgcccgggtggtgtggctggttgcgaacggctac
gccgaccctggccaggtcttgggcctgacctttacccgcaaggcggccggccaactgctg
cgccgggttcgatcccggttggcgcggttggccggcgccggactgatggcggccgaaccg
gatagatccggcgcgaaaggtatcgacggcgccacggccacgacacctgtggtgagcacc
tatcacgccttcgcgggcgcgctgctgcgcgagcacgggctgctgctcggcatcgagccc
gatacccggctgctcaccgagaccgggctgtggcagctggcgttcgacgtggtcagcggt
tatcccggggagctggacaccgaccgggatcccgctgcggtcaccgcgatggtgttgcgg
ctggccggccagctcgccgaacacctggtggacaccgacgcactgcgccacacgcacctg
gagctggagcggctggtgcacaccctgccgccgggcccgcgccagcgcgccgaacccaac
cagtcgctgctcaagatgctcgacactcagaccgaacgtgccgagctggtgccgttgatt
gaggccctgcaccagcgcatgcgggcggaacgggcaatggatttcggcgcccagatggcc
actgccgcgcgcctggcggaatccaacgaggccgtcggcgcccggttgcgcgcaacctac
cgggtggtgctgctcgacgagtaccaagacaccgggcacgcccagcgcatcgccctgtcg
tcgctgttcggcggcggtgtcgacgacgacctggcgctgaccgcggtgggtgacccgatc
cagtcgatctacggctggcgcggtgcctcggcgaccaacttgccccgattcgccaccgac
ttcccgctctccgacggcagtccggcgcccaccctggagctgcggaccagctggcgcaac
ccgccagaggtgctgcacctggccaacgagatctccgcggaggcacgccggcgttccgtg
acggtgcaatcgctccggccgcgcccggccgcgccccccggcgacgtgcgggtcgccctg
ctgcccgacgtcgtcaccgaagacgaatgggtcgccgaggccttgcagcggtgctaccgg
caggccgacgccgacggggtggatccgcccaccgccgccgtgctggtgcggcgcaacgcc
gacgcagcgcccctggccgaggcgatccgcgcccgcggcgtgccggtggaagtggtgggg
ctggccgggctgctgtctgtgccggaggtggccgacctggtggcgatgctgcggctgatc
caggagccgaccgccggcgcggcggcgatgcgggtgctgactgggccgcgctggcggttc
ggcgccgccgatctcgccgcgctgtggcgacgcgccgccgagctggcccggcccgagcag
tccggtgcgccggtatcggccgcggagatcgcggccacggccgggcccgattcggagacc
gcatgtctggccgatgcgttggccgatcctggtccggcagagcgctattcggccgtcggg
taccggcgcatcgtcgctctcgccgaagaactgacgttgctgcgcggccatctgtggcat
ccgctgcccgatttggtggccgaggtacgccgggtgctaggcctggactgcgaggtgctc
gccgcgcagccggtggcggcaagtgcggcgggtaccgaacaactcgacgccttcgccgat
gtggtggccggttacgccgagggtgccggggcacaggctgcgctgccgggtctgctggct
tacctggatgccgccgccgtggtggagaacgggttggcgccggcagcgccagcagtcgct
gccgaccgcgtccagatcctcaccgtgcatgccgccaaggggctggaatggcaggtggtc
gcgataccgcacctggtggcgcgggttttcccgtcgaccgcgtcgcgacgcagctggctc
tccgacgcatccgaactgccgccgctgctgcgcggcgaccgggcgcagccgtttgggccc
ggcggttcagcgaggttcgacggaggagaggcgaagctgggaccgcggcatgaacccggc
ggttcagcgaggttcgacggaggagaggcgaagctgggaccgccgcatgaacccggcggt
tcagcgaggttcgacggaggagaggcgaagctgggaccgccgcatgaacccggcggttca
gcgaggttcgacggaggagaggcgaagctgggaccgccgcatgaacccggcgatcacggc
gtcccgctgctcgacactgacgcggtcaccaaccgaaaacagctgtccgacgccatctcc
gaacatcagcgccgcttggatcagcggcgcgtcgacgaagagcggcggctgctctacgtc
gctgtcacccgagccgaagacaccctgctgatctctggccaccactgggggcagggcgag
gccaagccgcgcgggccgtcggatttcctcgccgagatcaaggcggtgatcgacagctca
gccgatgaggggacgccctgcgggacggtcgagcactgggcgcaggcgccggctgacgga
gagaaaaatccgttgtgcgacaccgcaaatgaaggagtgtggcccgctgacccgctggac
ggccgccgcggtgatgtcgaacgcggcgcggcactggtcgccgcgaaactgcaggccggc
gaaccccaggacgacacgccctcggctagccggtgggccgccgacgtggacgccctgctg
gcagagcgagccacggccgcaacccagcagacccgcaccctgcccaaccagctctcggtg
agcggtctggtcgagttgagccgtgaccccgatggcgcggggcagcgtctaagtcgccgg
ctcccggctcgaccagacccgcatgcgttgttgggcaccgcatttcacgattgggttcag
cgactctatggcgccgagcggctcttcgaacttgaagatctacccggcgccgccgacgcc
gacaccgcccgcgccgatgcgcaggagctggcccgtctgcaggcggcgttcctggaatcg
ccctgggcagcccgtactcccaccgccgtcgaggtgccgttcgagatggtcatcggcagc
cgagtggtgcgcggtcggatcgacgcggtgttcgtcgagcgcgacggcggcgtcaccgtg
gtggactggaagaccggaacgccccccgacgggcctgacgcgcgccggcacgcggctgtc
cagctcggcgtctaccggcttgcctgggcggcgttgaccggctgcccggcatcgcaggta
cgagccgccttccactatgtgcgttccgggaccaccgtcatcgccgacgagctgcccgaa
ctggctgacctggccgcgctgctcaacgcctga
DBGET
integrated database retrieval system
