KEGG   Mycolicibacter virginiensis: MJO54_17630
Entry
MJO54_17630       CDS       T08150                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mvm  Mycolicibacter virginiensis
Brite
KEGG Orthology (KO) [BR:mvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mvm03021]
    MJO54_17630
Transcription machinery [BR:mvm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MJO54_17630
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 Sigma70_ECF MarR_2 HTH_24 HTH_Crp_2 MarR PF0610-like_N HTH_3 DUF7343 HTH_IclR KORA HTH_ParB DUF1492 DUF134 HTH_31 Peptidase_inhib_put GerE
Other DBs
NCBI-ProteinID: ULP46612
LinkDB
Position
complement(3625337..3626125)
AA seq 262 aa
MTPRAAGSGSQSGSEYADVGDMFRELAQYDADSPDFRNRKDKIVERCLPLADHIARRFEG
RGELRDDLVQVARVGLVNAVTRFDVETGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGVATAELSQRLGRAPTASELAAELELSRDEVVEGLVAGSSYNTLSIDGGGSSD
EDDVRSIADTLGEVDARMDRIEDREALRPLLDALPERERTVLVLRFFESMTQTQIAERVG
ISQMHVSRLLAKSLAKLRDQLQ
NT seq 789 nt   +upstreamnt  +downstreamnt
gtgactccgcgtgccgccggcagcggctcacagtctggatcggagtatgccgacgtcggc
gacatgtttcgtgagctcgcccaatacgatgccgactcgcccgacttccgcaaccgcaag
gacaagatcgtcgagcggtgcctgccgctggccgaccacatcgcccgccggttcgaaggg
cgcggggagttacgggacgacctggttcaagtagctcgggtgggtctggtcaacgccgtg
acacgcttcgacgtcgagaccggctcggatttcgtctcgttcgcggttccgacgatcatg
ggcgaggtccgccgccatttccgcgacaacagctggtcggtcaaggttccccgccggctc
aaagagctgcaccttcggttgggtgtggccacagccgaactgtcacaacgcctgggacgg
gcgccgaccgcctccgaactcgcggccgaacttgagttgagccgcgacgaggtggtcgaa
ggcttggtcgcgggcagctcgtacaacacgttgtcgatcgacggtggcggcagctcggac
gaagatgacgtccgctcgatcgctgacaccctcggtgaggttgacgcccggatggaccgc
atcgaggaccgagaggcgttgcggcccttgctcgatgcccttccggaacgcgaacgcaca
gtgctggtgttgcggttcttcgagtcgatgacccagacccagatcgccgaacgggtcggc
atctcgcagatgcacgtgtcgcgcttgctcgcgaaatcgctggcgaagctgcgcgatcag
ctgcagtag

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