Mycolicibacter virginiensis: MJO54_17630
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Entry
MJO54_17630 CDS
T08150
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mvm
Mycolicibacter virginiensis
Brite
KEGG Orthology (KO) [BR:
mvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvm03021
]
MJO54_17630
Transcription machinery [BR:
mvm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MJO54_17630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_24
HTH_Crp_2
MarR_2
MarR
HTH_3
DUF7343
HTH_IclR
KORA
DUF1492
DUF134
HTH_31
GerE
Motif
Other DBs
NCBI-ProteinID:
ULP46612
LinkDB
All DBs
Position
complement(3625337..3626125)
Genome browser
AA seq
262 aa
AA seq
DB search
MTPRAAGSGSQSGSEYADVGDMFRELAQYDADSPDFRNRKDKIVERCLPLADHIARRFEG
RGELRDDLVQVARVGLVNAVTRFDVETGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGVATAELSQRLGRAPTASELAAELELSRDEVVEGLVAGSSYNTLSIDGGGSSD
EDDVRSIADTLGEVDARMDRIEDREALRPLLDALPERERTVLVLRFFESMTQTQIAERVG
ISQMHVSRLLAKSLAKLRDQLQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgactccgcgtgccgccggcagcggctcacagtctggatcggagtatgccgacgtcggc
gacatgtttcgtgagctcgcccaatacgatgccgactcgcccgacttccgcaaccgcaag
gacaagatcgtcgagcggtgcctgccgctggccgaccacatcgcccgccggttcgaaggg
cgcggggagttacgggacgacctggttcaagtagctcgggtgggtctggtcaacgccgtg
acacgcttcgacgtcgagaccggctcggatttcgtctcgttcgcggttccgacgatcatg
ggcgaggtccgccgccatttccgcgacaacagctggtcggtcaaggttccccgccggctc
aaagagctgcaccttcggttgggtgtggccacagccgaactgtcacaacgcctgggacgg
gcgccgaccgcctccgaactcgcggccgaacttgagttgagccgcgacgaggtggtcgaa
ggcttggtcgcgggcagctcgtacaacacgttgtcgatcgacggtggcggcagctcggac
gaagatgacgtccgctcgatcgctgacaccctcggtgaggttgacgcccggatggaccgc
atcgaggaccgagaggcgttgcggcccttgctcgatgcccttccggaacgcgaacgcaca
gtgctggtgttgcggttcttcgagtcgatgacccagacccagatcgccgaacgggtcggc
atctcgcagatgcacgtgtcgcgcttgctcgcgaaatcgctggcgaagctgcgcgatcag
ctgcagtag
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integrated database retrieval system
