Methanococcus vannielii: Mevan_0355
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Entry
Mevan_0355 CDS
T00554
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
mvn
Methanococcus vannielii
Pathway
mvn03030
DNA replication
mvn03420
Nucleotide excision repair
mvn03430
Mismatch repair
mvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mevan_0355
03420 Nucleotide excision repair
Mevan_0355
03430 Mismatch repair
Mevan_0355
03440 Homologous recombination
Mevan_0355
03460 Fanconi anemia pathway
Mevan_0355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvn03000
]
Mevan_0355
03032 DNA replication proteins [BR:
mvn03032
]
Mevan_0355
03400 DNA repair and recombination proteins [BR:
mvn03400
]
Mevan_0355
Transcription factors [BR:
mvn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Mevan_0355
DNA replication proteins [BR:
mvn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Mevan_0355
DNA repair and recombination proteins [BR:
mvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Mevan_0355
MMR (mismatch excision repair)
Mevan_0355
DSBR (double strand breaks repair)
HR (homologous recombination)
Mevan_0355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Rep_fac-A_C
OB_Ssb-like
DUF3127
OB_MEIOB_N
tRNA_anti_2
Zn_Ribbon_TF
POT1PC
RMI2
Zn_ribbon_TiaS
DZR_2
YukD
Zn_ribbon_6
DUF2536
DZR
Motif
Other DBs
NCBI-ProteinID:
ABR54264
UniProt:
A6UP42
LinkDB
All DBs
Position
complement(409420..411345)
Genome browser
AA seq
641 aa
AA seq
DB search
MNIEKLKQKILTKLSKKELEKRVNEKIEENSGLLGEESAVMLVAQEFGIEITYDDDEEYD
FSIKDIQDGQKNVEVSGKIIEVSNTKEFSKKDGSTGKLASITIGDNTGTTRLTLWNDKTE
LIEGLKKGDVIKIENAFSRKWNDKVELNSGSELSIEKLKKYDESRYPILKENYSISELLP
NLLAKINAEVILAYPKKEFSKKDGTTGQLKSLTLKDSTGSIRVTLWNELADFEVKKGDYV
EVKGYAKQGYSGLELSADNITIIREGQLEESLSENLKISELTDFKGEFVNVSGNILTISP
SREVSFNDRTSEVQDLYISDDTGRVKIAFWGLNKDVLKELNNGDYVKISNCKLRNYNDNS
GEKRADLTYSYLSELKKDKKLSKEIEEIVTPISEILSGKANKNDVTVVGMVVSAYPINEF
KRSNGSTGKVKNITIDDNSGSIRMSLWDNYAEMAILEGDILKIVHGYVKESGEYMDLSVG
RFGQILVNPKGISVKSNRSFIVDIEEGKSTEIRGTVVDFRKQDLILNLCPNCRKKLNASG
KEYVCETCGTVTPNELLVSTVAIDDGTSVINCRIYGQNVEKITGMSKNELKSSNLDALSK
ILGRDFIFYGSPNIRNDELEFSVKSVSNIDINREIDALEQI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaaaagctaaaacaaaagatattaacgaaattatccaaaaaagaacttgaa
aaaagagtaaacgaaaaaattgaagaaaattcaggcttgcttggtgaagaaagtgcagta
atgcttgttgcacaggaatttggtattgaaattacttacgatgacgacgaagaatatgat
ttttcaataaaagacattcaagacggccaaaaaaatgttgaagtatctggaaaaataatt
gaagtttccaatacaaaagaattcagcaaaaaagatggaagtactggaaaacttgcatcg
ataacaattggagacaatactggaactactcgacttaccttatggaatgataagactgag
cttattgaaggtttaaaaaaaggggacgttataaaaattgaaaatgcatttagtagaaaa
tggaatgataaagttgaattaaatagcggttctgaattatcaattgaaaaattaaaaaaa
tacgatgaatcaaggtatccaattttgaaagaaaattacagtatttctgaacttttacca
aatcttttggcaaaaattaatgcggaagtaatcttggcataccctaaaaaggaattcagc
aaaaaagacggtacaacagggcagttaaaatctttaactttaaaggacagtactggaagt
attcgcgttacactctggaatgaattagcagattttgaagttaaaaaaggcgattacgtg
gaagtaaaggggtatgcaaaacagggttattcgggacttgaattatctgccgacaatatc
accattataagagaaggacagttagaagaatctttaagtgaaaatttaaagatttcagaa
cttactgactttaaaggtgaatttgtaaatgtttctggaaatatacttacaatttcaccg
tcaagggaagtctcatttaatgatagaacctctgaagttcaggatttgtacatttcagat
gatacaggccgtgtaaaaattgcattttggggccttaataaggacgtcttaaaagagcta
aataacggggattatgtaaaaatttcaaactgtaagttacgaaattataatgataattct
ggtgaaaaacgagctgatttaacttacagctacctttcagagcttaaaaaagataaaaaa
ttaagtaaggagatagaagagatagtaactccaatttccgaaatattatctggaaaagcc
aataaaaatgatgttacagtcgttggaatggttgtttcagcttatcctataaatgaattt
aaaagaagtaatggttcaactggaaaggttaaaaatattactatagatgataattcagga
agcattcgaatgtcgctatgggataattacgcagaaatggccattttagaaggcgatatt
ttaaaaatagttcacggttacgttaaagaaagtggagaatatatggatctttcagtaggc
agatttgggcagattttggtaaatccaaaaggaatatcggtaaaatctaaccggtcattt
attgtagatattgaagaaggcaaatcaacagaaattcgtggaactgttgttgactttaga
aaacaggatttaatacttaatttatgtccaaactgtaggaaaaaacttaatgcttccgga
aaagagtacgtatgtgagacttgtggaactgtaactccaaatgaacttttagtttcaaca
gttgcaatagatgacggaacttcagttataaattgcagaatttatggtcagaatgtggaa
aaaattacaggaatgtctaaaaatgaacttaaatcttctaacttggatgcactttcaaaa
attcttggaagagactttattttttacggaagtccaaatattagaaacgatgaactagaa
ttttctgttaaaagtgtgtctaatattgatattaatcgtgaaatagatgcattggaacag
atttaa
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