Methanococcus vannielii: Mevan_1180
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Entry
Mevan_1180 CDS
T00554
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mvn
Methanococcus vannielii
Pathway
mvn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mevan_1180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvn03019
]
Mevan_1180
03009 Ribosome biogenesis [BR:
mvn03009
]
Mevan_1180
04131 Membrane trafficking [BR:
mvn04131
]
Mevan_1180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvn04147
]
Mevan_1180
Messenger RNA biogenesis [BR:
mvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mevan_1180
Ribosome biogenesis [BR:
mvn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mevan_1180
Membrane trafficking [BR:
mvn04131
]
SNARE
SNARE associated proteins
Others
Mevan_1180
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mevan_1180
Exosome [BR:
mvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mevan_1180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_2
AAA_14
AAA_5
AAA_22
AAA_33
nSTAND3
AAA_28
IstB_IS21
AAA_18
DUF815
Mg_chelatase
RNA_helicase
ABC_tran
AAA_7
ATPase
Sigma54_activat
Zeta_toxin
AAA_17
AAA_3
NPHP3_N
TsaE
AAA_24
PhoH
ATP-synt_ab
Sigma54_activ_2
AAA_lid_PRS2_C
AAA_30
Parvo_NS1
SLFN-g3_helicase
Vps4_C
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABR55078
UniProt:
A6URF6
LinkDB
All DBs
Position
complement(1193243..1195588)
Genome browser
AA seq
781 aa
AA seq
DB search
MVDLMVAEAYQGDVGKGIVRIDPLTMEKLSLKPGDAIEISGKEKTYATVWRGYIEDQGKG
IIRMDGILRQNTKAGIGDKVKITVVEVKEAKKITLAPMQAVRFSTGFESYVGSRLVEQVV
DKGSKVVIGVLGTAFPFIVTGTTPKGPVKINEYTQIELKTEPVTELKETKVPNVTYEDIG
GLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFY
TINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASGEVERRMVAQ
LLTLLDGLESRGQVVILAATNRPDSIDMALRRPGRLDRELTIGIPDRTARKEILQIHTRN
MPLQPDYEKNNVISVLNELIGELDRNKIEEVVKKVENSAKEELIEKILKENDLEDKVKLK
LNQMMIKELADKTHGFAGADLAALSKEAAMKTLRRILPDIDLEKEEIPREVLDKIKVTRD
DFFGGLKEVEPSALREVLVEVPNVRWNDIGGLEEIKQDLKEAVEWPIKNREIFERMGIRP
PKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAA
PTVVFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQ
ALLRPGRLDRIVLVQVPDENARYEIFKVHAKSMPLSKDVDLKALATETKGYTGADIEAVC
REAAMIALREDINSKEVFLKHFKGALNRIAPSVKDDDMDAYKDLAREYGRSIESEKDENK
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggtagatttaatggttgctgaagcttatcaaggcgatgtaggaaaaggaatcgtaaga
attgacccattaacaatggaaaagttatctttaaagcccggtgatgcaatagaaatttct
ggaaaagaaaaaacctatgcaacagtctggagaggatacattgaagaccaaggaaagggt
ataataaggatggatggtattttaagacagaataccaaagcaggaatcggcgataaggta
aaaattactgtagtagaagtaaaagaagctaaaaaaataactttagctccaatgcaggcc
gtaagatttagtactggctttgaaagttacgttggaagtaggctagttgaacaagttgta
gataaaggttcaaaagtagtaataggggtacttggaacagcgttccctttcattgtaacg
ggcactacgccaaaagggccggtaaaaattaacgaatacacccaaattgaacttaaaacc
gaacctgttactgaattaaaagaaactaaagttccaaatgtaacatatgaagatatcggt
ggattaaaagaagaagttaaaaaaatcagggaaatggttgaacttccaatgcggtaccct
gaattatttgataaacttggaatcgaacctccaaaaggagttttacttgcagggccccct
ggaactggaaaaacactacttgcaaaagcagttgcaaatgaagctggtgctaatttctac
actattaacggcccagaaatcatgagtaagtacgttggagaaactgaagaaaacttaaga
aagatatttgaagaagcagaagaaaactcgccttcaataatatttatcgatgaaatcgat
gcagttgcaccaaaaagagatgaagcaagcggtgaagttgaaagaagaatggttgcacag
cttttaacattattagatggtcttgaaagtaggggccaggttgtaatccttgctgcaact
aatagacctgattcaatagatatggcgcttagaagacctggaaggcttgaccgtgagctt
acaataggtattcctgatagaactgcaagaaaagaaattcttcaaattcatacaagaaat
atgcctcttcaaccagattatgaaaaaaataatgttatttcagtattaaatgaactcatt
ggtgaattagatagaaataaaattgaagaagtagttaaaaaagttgaaaattctgccaaa
gaagaactgattgaaaaaatacttaaagaaaacgatttggaagataaggtaaagttaaaa
cttaaccaaatgatgataaaggaacttgcagataaaacacatggttttgcaggggctgac
ttagcagcactttcaaaagaagctgcgatgaaaacattgcgaagaattttaccagatata
gaccttgaaaaggaagaaattccaagagaggttcttgacaaaattaaagttacaagagac
gacttttttggcggattgaaagaagttgaaccatctgcattaagagaagtacttgtagaa
gttccaaacgtaaggtggaatgatataggtggccttgaagaaataaagcaagatttaaaa
gaagctgttgaatggccaattaaaaatagagaaatatttgaacgaatgggcataaggcct
ccaaaaggcgttttattatttgggccacctggaactggaaaaacactacttgcaaaagca
gttgcaaatgaaagcgaagcaaactttataagtgtcaaaggccctgaaattttcagtaag
tgggttggagaaagtgaaaaggcaattcgtgaaatatttagaaaggcacggcaggctgct
ccaacagtagtattctttgatgaaatcgattctgttgccccaaaaagaggaatggacttt
ggaagtagtggagttactgaaaaggtcgtaaatcagcttttaaccgaacttgatggcctt
gaagaaccaaaagatgtcgtgataattgctgcaacaaataggcccgatattttagaccaa
gctttattaagacctggaagacttgataggatagttttagttcaagtgcctgatgaaaat
gcaaggtatgaaatattcaaagtacatgcaaaatcaatgcctctttcaaaagatgttgat
ttaaaagcgcttgcaaccgaaactaaaggatataccggtgcggatattgaagcagtatgt
agggaagctgcaatgattgcacttagggaagacattaattcaaaagaagtatttttaaag
cactttaaaggtgcattaaatagaattgcaccatctgtaaaggatgatgacatggacgca
tataaagaccttgcaagagaatacggaagaagcattgaaagtgaaaaagacgaaaataaa
gaataa
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