Methanococcus vannielii: Mevan_1629
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Entry
Mevan_1629 CDS
T00554
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mvn
Methanococcus vannielii
Pathway
mvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mevan_1629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvn03019
]
Mevan_1629
03009 Ribosome biogenesis [BR:
mvn03009
]
Mevan_1629
Enzymes [BR:
mvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mevan_1629
Messenger RNA biogenesis [BR:
mvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mevan_1629
Ribosome biogenesis [BR:
mvn03009
]
Prokaryotic type
rRNA helicases
Mevan_1629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABR55521
UniProt:
A6USP9
LinkDB
All DBs
Position
1645111..1646727
Genome browser
AA seq
538 aa
AA seq
DB search
MDSFRNLGLSEDIINALEKKGFTEPTPIQEKAIPILIKGEMDIVGQAQTGTGKTAAFGLP
IIETIDTNSRNTQALILTPTRELAIQVAEEIDSLKGSRRLNIFPVYGGQSIDRQIKELKR
GVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVNTEKRML
LFSATLPDSIMKLAENYMRDYETIKVKKQQLTTNLTDQSFYEISPRDKFELLSRIMDTEK
EFYGLIFCKTKADVDDLSARLVERGYPAEGLHGDMTQAQREKTLDKFKRRRTTVLVATDV
AARGIDINELTHVVNYDLPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYILKIA
KTEIRREEVPDIKDVIGAKRRKIKTDIKTLMESGKFGEYEKMAEELLEEGEAKDIIAAIL
KHAFKDEFLAENYKKIGKSSSQSSQRSDSQSNRKRQSFDGENIRLFVALGKLDKMNPKKL
VEYISKKSEVKGRDIDEVKVFEKFSFVTVSSENAETIIDSFKNEKRGRRAIIEVASAN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacagttttagaaatttaggcttatctgaggatataatcaacgctttggagaaaaaa
ggttttactgaacctactcctattcaagaaaaagcaattccaatattaataaaaggtgaa
atggatattgtaggtcaggcacaaaccggtactggaaaaaccgccgcttttggacttcca
attatcgaaacaattgatactaactctagaaatacccaagcacttattttgacacctaca
agggaattagcaatacaggttgcagaagaaatcgattctttaaagggttcaagaagatta
aatatattcccagtttatggcggtcaatcaattgacaggcaaataaaagagttaaaaagg
ggagttcagatagttgtaggaacccctggaagaatactcgaccacatttcaagaagaaca
ataaagcttgaaaatgtttcatacgttgttttagacgaagctgatgaaatgctaaacatg
ggttttattgacgacgttgaagaaattctaaaatccgtaaatactgaaaaaagaatgctc
ttattttctgcaacacttccagacagcattatgaagcttgctgaaaactacatgagggac
tacgaaacaattaaagttaaaaagcaacaacttacaacaaatttaactgatcaatcattc
tacgaaatttctccaagagataaatttgaattactttcaagaataatggatactgaaaaa
gagttttacggtttaatattctgtaaaacaaaagcagatgtagatgacctttcagcaaga
ttagttgaaaggggctaccctgcagaaggtcttcacggtgacatgacccaagcacaaagg
gaaaaaacacttgataaatttaaaagaagaagaacaacagtacttgtagcaacagacgtt
gcagcaagaggaattgatattaacgaattaacacacgttgtaaattatgatctcccgcaa
aaccctgaatcttacgttcacagaattgggagaactggaagagctggaaaacaaggatat
gcaattacatttgtagaaccttcagaatttagaaaattcaaatacatcttaaaaattgca
aaaacggaaattagaagagaagaagtcccagatataaaagatgttatcggagctaaaagg
agaaaaataaaaaccgatatcaaaaccctaatggaatctgggaaattcggcgaatatgaa
aaaatggctgaagaattattggaagagggcgaagcaaaggatataattgcagcgatttta
aaacatgcatttaaagatgaatttttggctgaaaactacaaaaaaattggaaaaagttca
agtcaatcaagtcaaaggtctgattcccaaagtaaccggaaaagacaatcatttgacggg
gaaaacataagactctttgttgcattaggaaaactcgataaaatgaatcctaaaaaactt
gtagagtacatttctaaaaagtcagaagttaaaggaagagatattgacgaagtaaaagtc
tttgaaaaattctcatttgtaaccgtttcttctgaaaatgcagaaacaattatagattcg
ttcaaaaacgaaaaaagaggaagaagagcaattattgaagttgcatcagctaactaa
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