Marinivivus vitaminiproducens: P4R82_01350
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Entry
P4R82_01350 CDS
T11297
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
Organism
mvp Marinivivus vitaminiproducens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF5887
Motif
Other DBs
NCBI-ProteinID:
WGF88601
LinkDB
All DBs
Position
282534..286631
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AA seq
1365 aa
AA seq
DB search
MPYSFTGRKRIRKSFGKIPEVTVMPNLIEVQRTSYEHFLQMHVAVPDRQMHGLQEVFTSV
FPIKDFGDKAALDFVKYDLEEPKYDVDECQQRGITFAAPLRVTLRLIVWDVDDDTGSRTV
RDIKEQDVYMGDMPLMTDNGTFVINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKFLFAA
RIIPYRGSWLDFEFDAKDLVYVRIDRRRKLPVSTLLLALGLTPEEILARFYGKLTVRRQG
EGYAVPFRPDRLRGQKFVSDLLDARSGEVLIEAGTKATPRQLRKMEEDGVTELFEPAENL
VGKFVAEDLIDANTGLVFVEAGDELTMDSLEKLAEAGVDELPLLDIDHTTVGGYIRNTLA
LDKSSGREDALLDIYRVLRPGEPPTIETAETLFNGLFFDVERYDLSPVGRVKMNARLDLE
GDDSIRILRNDDILAVVEGLVNIKDGRGEVDDIDHLGNRRVRSVGELMENQFRVGLLRME
RAVRERMSSVEIDAAMPHDLINAKPVAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARINKYGFIESPYR
RVVDGKVSGEVVYLSAMEEGKYTIAQANADLDADGRFVNDLISCRVSGEFELARREDIEF
IDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIKAEAPFVGTGMEAVVARDS
GAAVVAKRGGIVDQVDASRIVIRVTDEQARADSVVDIYNLRKFQRSNQNTCITQRPLVQK
GDKVQAGDIVADGPSTQLGELALGRNVLVAFMPWNGYNFEDSILISERIVRDDVFTSIHI
EEFEVMARDTKLGPEAITRDIPNVGEEALRNLDEAGIVYIGAEVKAGDILVGKVTPKGET
PMTSEEKLLRAIFGEKAADVRDSSLKVPPGVQGTVVEVRVFNRRGVEKDERAIAIERAEI
DRLAKDRDDERAILERNIYGRLRELLEGQTATTGPRGVKVGTTLSAELLDGMARREWWEL
GVDDATRMVEIEQLRRQHGDGTRQLQDRFENKVEKLQRGDELPPGVLKMVKVFVAVKRKL
QPGDKMAGRHGNKGVISKIAPLEDMPYLEDGTSVDIVLNPLGVPSRMNVGQILETHLGWA
CSKLGAQVGDLMRRMGDQVDVGALRQGLKEVYKGVDADEIDGYADEEIVELARNVGPGVP
MATPVFDGASEPDIVRLLEEAGVNRSGQVTLIDGRTGEPFDRQVTVGYIYMLKLGHLVDD
KIHARSVGPYSLVTQQPLGGKAQFGGQRFGEMECWALQAYGAAYTLQEMLTVKSDDVSGR
TKIYEAIVRGEDTFEAGIPESFNVLVKELQALGLDVELEQDASKI
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacagcttcacgggtcgcaagcgcattcgcaagagcttcgggaagattcccgaa
gtgacggtgatgccgaacctgatcgaagttcaaaggacatcttatgagcattttctgcaa
atgcatgtggcggtcccggaccgtcagatgcatggcttgcaggaagtcttcacgtccgtc
ttcccgatcaaggactttggcgacaaggccgccctcgatttcgtcaagtacgatctcgag
gagccgaaatacgacgtcgacgagtgccagcagcgcggcatcaccttcgccgcgccgctg
cgcgtcaccctgcgcctgatcgtatgggatgtcgacgacgacaccggctcgcgcacggtc
cgcgacatcaaggagcaggacgtctacatgggcgacatgcccttgatgacggacaacggc
accttcgtgatcaacggcaccgagcgtgtgatcgtctcgcagatgcaccgctcgccgggc
gtcttcttcgatcacgacaagggcaagacccactcgtccggcaagttcctgttcgccgcg
cggatcatcccctatcgcggttcgtggctcgacttcgagttcgacgccaaggacctcgtc
tatgtccgcatcgaccggcgccgcaagctgcccgtgtcgacgctgctgctggcgctcggc
ctgacgccggaggagatcctggcgcgcttctacggcaagctcacggtccgccgtcagggc
gaaggctacgccgtgccgttccggccggaccgtctgcgcggtcagaagttcgtcagcgac
cttctggacgcgcgcagcggcgaggtgctgatcgaggccggcacgaaggcgacgccgcgc
cagctccgcaagatggaggaggacggcgtcaccgagctgttcgagccggccgagaacctg
gtcggcaagttcgtcgccgaggacctgatcgacgccaacaccggcctggtgttcgtcgag
gcgggcgacgagctgaccatggacagcctggagaagctggccgaggccggcgtcgacgag
ctgcccctgctcgacatcgaccacaccacggtgggcgggtacatccgcaacaccctggcg
ctcgacaagagcagcggccgcgaggacgcgctgctcgacatctatcgcgtgctgcgtccg
ggcgagccgccgaccatcgagacggcggagaccctgttcaacggcctgttcttcgacgtc
gagcgctacgacctgtcgccggtcggccgggtcaagatgaacgcgcgcctcgatctcgag
ggcgacgacagcatccgcatcctgcgcaacgacgacatcctcgccgtcgtcgagggcttg
gtgaacatcaaggacggccgcggcgaggtcgacgacatcgatcacctcggcaaccgtcgg
gtgcggtcggtcggcgagctgatggagaatcagttccgcgtcggcctgctgcgcatggag
cgcgcggtccgcgagcgcatgagctcggtcgagatcgacgcggcgatgccgcacgacctg
atcaacgccaagccggtcgccgctgcggtgcgcgagttcttcggcagctcgcagctgtcg
cagttcatggaccagaccaaccccctgtccgagatcacgcacaagcggcgcctgtcggcg
ctcgggccgggcggcctgacccgcgagcgcgccggcttcgaggtgcgcgacgtgcatccg
acccattacggccggatctgcccgatcgagacgccggaaggcccgaatatcggcctgatc
aacagcctcgcgacctacgcccggatcaacaagtacggcttcatcgagagcccgtatcgc
cgggtggtcgacggcaaggtgtcgggcgaggtcgtctatctctcggcgatggaagagggc
aagtacacgatcgcccaggccaacgcggatctcgatgccgacggccgtttcgtcaacgac
ctgatcagctgccgcgtgtccggcgagttcgagctggcgcggcgggaggacatcgagttc
atcgacgtctcgcccaagcagctggtctcggtcgcggcggcgctcatcccgttcctcgag
aacgacgacgccaaccgcgcgctcatgggctcgaacatgcagcgccaggccgtgccgttg
atcaaggcggaggcgcctttcgtcggcaccggcatggaagcggtggtcgcgcgtgattcg
ggcgcggccgtggtggcgaagcggggcggcatcgtcgaccaggtcgacgcgtcgcgcatc
gtcatccgcgtcaccgacgagcaggcccgcgcggactccgtggtcgacatctacaacctg
cgcaagttccagcgctccaaccagaacacctgcatcacgcagcggcctctggtgcagaag
ggcgacaaggtccaggccggcgacatcgtcgcggacgggccgagcacccagctgggcgag
ctggcgctggggcggaacgtgctcgtcgcgttcatgccttggaatggctacaacttcgag
gactcgatcctcatctccgagcgcatcgtgcgcgacgacgtcttcacctcgatccacatc
gaggagttcgaggtcatggcgcgcgacacgaagctcgggccggaggcgatcacccgcgac
atcccgaatgtcggcgaggaggcgctgcgcaacctcgacgaggcgggcatcgtctatatc
ggcgccgaggtgaaggcgggcgacatcctggtcggcaaggtcacgcccaagggcgagacg
ccgatgacctcggaggaaaagctgcttcgcgccatcttcggcgagaaggcggccgacgtc
cgcgacagctcgctcaaggttccgcccggcgtgcagggcacggtggtcgaggtccgcgtc
ttcaatcggcgcggcgtcgagaaggacgagcgcgcgatcgcgatcgagcgcgccgagatc
gaccggctcgcgaaggatcgtgacgacgagcgcgccatcctggagcgcaacatctacggc
cgcctgcgcgagctgctcgagggccagaccgcgaccacgggcccgcgcggcgtcaaggtc
ggcaccacgctctcggccgagctgctggacggcatggcgcggcgcgagtggtgggagctg
ggtgtcgacgatgccacgcgcatggtcgagatcgagcagctgcgccgccagcacggcgac
ggcacccgtcagctgcaggaccgcttcgagaacaaggtcgagaagctgcagcgcggcgac
gagctgccgcccggcgtgctgaagatggtcaaggtgttcgtcgcggtgaagcgcaagctg
cagcccggcgacaagatggccggccgccacggcaacaagggcgtcatctccaagatcgcg
cctctcgaggacatgccgtatctcgaggacggcacctcggtcgacatcgtgctcaacccg
ctgggcgtgccctcgcgcatgaatgtcggccagatcctggagacccatctgggctgggcc
tgcagcaagctcggcgcccaggtcggcgatctcatgcgccgcatgggcgatcaggtcgat
gtcggcgctctccggcaggggctgaaggaggtctacaagggcgtcgatgccgacgagatc
gacggctatgccgacgaggagatcgtcgagctggcgcgtaatgtcggaccgggcgtgccg
atggcgacgcccgttttcgacggcgcgtcggagcccgacatcgtccgcctgctggaggag
gccggggtcaaccgctccggccaggtcacgctgatcgacggccgcaccggcgagccgttc
gaccggcaggtgaccgtcggctacatctacatgctgaagctcggccatctcgtggacgac
aagatccacgcgcggtcggtcggcccctacagcctcgttacccagcagccgctgggcggc
aaggcgcagttcggcggccagcgcttcggcgagatggaatgctgggccctccaggcctac
ggcgccgcctacacgctgcaggagatgctcacggtcaagtccgacgacgtgtcgggccgg
accaagatctacgaggcgatcgtccgcggcgaggacacgttcgaggccggcatcccggag
agcttcaacgtcctggtcaaggagcttcaggctcttggcctcgacgtcgagctcgaacag
gacgccagcaagatctaa
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