Marinivivus vitaminiproducens: P4R82_04600
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Entry
P4R82_04600 CDS
T11297
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
mvp Marinivivus vitaminiproducens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
WGF89220
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Position
986607..989180
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AA seq
857 aa
AA seq
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MARARRQAQSASRPEDGGALGRYRGKRDFARTKEPAGAEPASGGRHAYLIQKHDARRLHY
DLRLELGGVLKSWAVTKGPSFDPADKRLAIHVEDHPLEYGTFEGTIPKGQYGGGTVMLWD
EGTWTPVDGDPDAAYADGHMKIAIRGRKLKGRWALVRMGGKARREKQDAWLLIKEKDDHA
RPGEAGLPDDDVSVQTGRSMDAIAKGDAVWDTTPAEDGPRDPTRTKGAKRARKKAAPSIP
GFVPPQLATLVTEAPGGQEWLHELKYDGYRLQIRIEDGKATVRTRNEKDWTHRFPALAKA
AAKLGAATAILDGEAVVLDERGVSRFGLLQHALGAEDDRAVVLYAFDLLFRDGEDLRRRP
LVERKEGLQALLGKPGARDRIRYSDHVIGQGPEMLRQAGKLGAEGIVAKRVDSLYRSGRG
KTWQKVKVDQRQEFVIGGWTLRKDGKGGLGALLVGTFEGKELRYAGRVGSGWSDAQGRRL
IERFEALGRRTSPFAGNQAEARKGASWVKPEPVAEIHFGAWTEDGILRHARLVGMREDKK
AKEVGRERAAPPKPAASAGRVLWDRGEKEPVMAGVRISHPDRVVLDDPDITKGDLAAYYE
RAMDRILPEIKDRPLSVIRCPGGLEDGCFYQRHRAPGMPKSVRPITVQGKDGKAEEYFTV
GTAEGVLALVQFNAIELHPWGAHADKPETPDRLIFDLDPDEGLGWDRVIEAALEMRRRLA
DARLESFVKTTGGKGLHVVAPIERRHSWNEAKAFASGLAHAMAEDSPKRFTATLSKQSRK
GRLFVDYLRNDRRSTAVAAYSVRSRSGGPVAMPITWDEVTPALDPKAYTVFTVPDLLNER
PDPWAGIARIKQRLPKS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagcaaggcggcaggcacaaagcgcaagtcggcctgaggacggcggcgcgctc
gggcgctaccggggcaagcgcgatttcgccaggacgaaggagccggcgggcgcggagccc
gcttcgggcgggcgtcatgcctatctcatccagaagcacgacgcgcggcggctgcactac
gatctgcgcctggagctgggcggcgtgctcaagagctgggcggtgaccaaggggccgtcg
ttcgatccggccgacaagcgcctggccatccatgtcgaggaccacccgctcgaatacggc
acgttcgagggaaccatacccaagggccagtatggcggcggcaccgtcatgctctgggac
gaggggacgtggacgccggtcgacggcgatccggatgcggcctatgccgacggccatatg
aagatcgcgattcggggccgcaagctgaaaggccgctgggcgctcgtgcgcatgggcggc
aaggccaggcgcgagaagcaggacgcgtggctgctgatcaaggagaaggacgaccacgca
cggccgggcgaggccggcctgccggacgacgacgtcagcgtccagaccgggcggagcatg
gacgccatcgccaagggcgacgcggtctgggacacgacgccggccgaggacgggccgcgc
gatccgacgcggacgaagggcgccaagcgcgcgcggaagaaggcggcgccgtcgataccg
ggcttcgtaccgccgcagctcgcgaccctggtcacggaggcgcccggcggccaggaatgg
ctgcacgagctgaaatatgacggctaccgcctgcagatccgcatcgaggacggcaaggcg
accgtgcgcacgcgcaacgagaaggactggacgcatcgcttcccggcgcttgccaaggcg
gcggccaagctcggcgcggcgacggcgatcctggacggcgaggcggtggtgctggacgag
cgcggcgtcagccggttcggcctgctgcagcacgccttgggcgccgaggacgatcgcgcc
gtcgtcctctatgcgttcgacctcctattcagggacggcgaggacctgcgcaggcgtccc
ctggtcgagcgcaaggaggggttgcaggccctgctgggcaagccgggcgcgcgcgaccgc
atccgctacagcgaccatgtgatcggccaggggccggagatgctgcgccaggccggcaag
ctgggcgcggagggcatcgtggccaagcgggtcgacagcctgtatcgcagcggccggggc
aagacctggcagaaggtcaaggtcgatcagcgccaggagttcgtgatcggcggctggacc
ttgcgcaaggacggcaagggcggactgggcgccctcctggtcggcacgttcgagggcaag
gagctgcgctatgccgggcgggtcggcagcggctggtcggacgcgcagggccgtcggctt
atcgagcggttcgaggccctcgggcgcaggacctcgcccttcgccggaaaccaggccgag
gcacgcaagggcgcgtcctgggtgaagcccgagccggtcgccgagatccacttcggcgcc
tggaccgaggacggcatcctgcgccatgcaaggctggtcggcatgcgcgaggacaaaaag
gcgaaggaggtcggccgcgagcgcgcggcgccgcccaagccggcggcctcggccggccgc
gtcctgtgggatcgaggggagaaggagccggtcatggcgggcgttaggatcagccatccc
gatcgggtcgtgctcgacgatcccgacatcaccaagggcgacctcgccgcctattacgaa
cgggcgatggaccggatcctgcccgagatcaaggaccggccgctcagcgtgatccgctgt
cccggcgggctggaggacggctgcttctaccagcgccatcgcgcgccgggcatgccgaaa
tcggtccggccgatcaccgtccagggcaaggacggcaaggcggaggagtacttcacggtc
ggcacggccgagggcgtgcttgcgctcgtgcagttcaacgcgatcgagctgcatccctgg
ggcgctcacgccgacaagccggagacgccggaccggctgatcttcgacctcgatcccgac
gaagggctcggctgggaccgggtgatcgaggcggcgctggagatgcgccggcgcctggcc
gacgcccggctcgagagcttcgtcaagaccacgggcggcaaggggctgcatgtcgtcgcc
ccgatcgagcgccgccattcctggaacgaggccaaggcgttcgcgagcgggctcgcccac
gccatggccgaagacagcccgaaacgtttcaccgcgacgctgagcaagcagtcgcgcaag
ggccgcctgttcgtcgactatctccgcaacgaccggcgctcgaccgccgtggcggcctat
tcggtccgcagccggagcggcggtcccgtcgcgatgccgatcacatgggacgaggtgacg
cccgcgctcgatcccaaggcctacaccgtgttcacggtgccggaccttttgaacgaacgc
ccggatccctgggccggcatcgccaggatcaaacaacgcctgcccaagtcctga
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