Marinivivus vitaminiproducens: P4R82_18550
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Entry
P4R82_18550 CDS
T11297
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mvp Marinivivus vitaminiproducens
Pathway
mvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P4R82_18550 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvp03021
]
P4R82_18550 (rho)
03019 Messenger RNA biogenesis [BR:
mvp03019
]
P4R82_18550 (rho)
Transcription machinery [BR:
mvp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P4R82_18550 (rho)
Messenger RNA biogenesis [BR:
mvp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P4R82_18550 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA
ATPase_2
AAA_22
AAA_14
Spore_III_AA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WGF90684
LinkDB
All DBs
Position
complement(3861648..3862898)
Genome browser
AA seq
416 aa
AA seq
DB search
MNLTELKRKPAAELLKYAEELGIDNASTMRKPDLVFATLKRLAEADVPIHGDGVLEILQD
GFGFLRSPDVNYVAGPDDIYVSPSQIRRFGLRTGDVVDGQVRAPKEGERYFALLKVNTIN
FGSQENARHRVHFENLTPYFPTRKLTLEHKLAKDFSTRVIDITAPLGKGQRALIVAPPRV
GKTVLMQSIAHAIMENHPECYLIVLLIDERPEEVTDMQRTVRGEVVSSTFDEPATRHVQV
AEMVIEKAKRLVESGRDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFG
AARNIEDGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLDRRLADKRTYPAMDINK
SGTRKEELLVDRSTLSRMWVLRRILSSMGTIDAMEFLLDKMRYAKTNNDFWETMNS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaccgagctcaagcgcaagccggccgccgagttgttgaaatacgccgaggag
ctcggcatcgacaacgcgagcacgatgcgcaagccggacctcgtcttcgccacgctcaag
cgcctggccgaggccgatgtgccgatccacggcgacggcgtgctcgaaatcctccaggac
ggcttcggcttcctgcgcagcccggacgtcaactacgtcgccggacctgacgacatctac
gtgtcgccctcgcaaatccgccgtttcggcctgcgcacgggcgatgtcgtcgacggtcag
gtgcgcgcgccgaaggagggcgagcgctacttcgcgctcctcaaggtcaacacgatcaat
ttcggcagccaagagaacgcgcgccaccgcgttcacttcgagaacctgacgccctacttc
ccgacgcggaagctgacgctcgagcacaagctcgccaaggatttcagcacgcgggtgatc
gacatcacagcgccgctcggcaaagggcagcgcgctttgatcgtggcgccgccgcgcgtc
ggcaagaccgtgctgatgcagagcatcgcgcatgcgatcatggagaaccatccggagtgc
tacctgatcgttctcctgatcgacgagcgcccggaagaggtcaccgacatgcagcgcacg
gtgcgcggcgaggtcgtgtcctcgaccttcgacgagccggcgacccggcacgtccaggtc
gccgagatggtgatcgagaaggccaagcgcctggtcgagagcggccgggacgtgatcatc
ctgctggattcgatcacgcggctcgcgcgcgcctacaacacggtcgtgcccagttcgggc
aaggtcctgaccggcggtgtcgacgccaacgccctgcagcggccgaagcgcttcttcggc
gcggcccgcaacatcgaggacggcggctcgctgaccatcatcgcgaccgcgctgatcgag
accggctcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggcaattccgag
atcgtcctcgaccgccgtctcgccgacaagcggacctacccggcgatggacatcaacaag
tccggtacccggaaggaagagctcctggtcgatcgctcgaccctgtcacgcatgtgggtc
ctgcgccgcatcctgtcctcgatgggcacgatcgacgccatggagttcctgctcgacaag
atgcgctacgccaagaccaacaacgatttctgggaaaccatgaactcgtag
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