Mycolicibacterium vaccae: MYVA_1170
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Entry
MYVA_1170 CDS
T04356
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mvq
Mycolicibacterium vaccae
Pathway
mvq00521
Streptomycin biosynthesis
mvq00523
Polyketide sugar unit biosynthesis
mvq00525
Acarbose and validamycin biosynthesis
mvq00541
Biosynthesis of various nucleotide sugars
mvq01100
Metabolic pathways
mvq01110
Biosynthesis of secondary metabolites
mvq01250
Biosynthesis of nucleotide sugars
Module
mvq_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MYVA_1170 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MYVA_1170 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MYVA_1170 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MYVA_1170 (rfbB)
00525 Acarbose and validamycin biosynthesis
MYVA_1170 (rfbB)
Enzymes [BR:
mvq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MYVA_1170 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ANI38392
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All DBs
Position
complement(1202934..1203929)
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AA seq
331 aa
AA seq
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MRLLVTGGAGFIGANFVRRAVRERPDVRVTVLDSLTYAGSRESLRDVESEIRLVEGDITD
SGLVGALVGESDAVVHFAAETHVDNALADPEPFVHTNVVGTFTILEAVRHAGVRLHHVST
DEVYGDLELDDPARFTEATPYNPSSPYSSTKAAADMLVRAWVRSYKLAATLSNCSNNYGP
YQHVEKFIPRQITNVLTGRRPKLYGTGANVRDWIHVDDHNRAVWRILTDGAIGRTYLIGA
DGERDNLSVMRTILRLMGRSPDDFDHVTDRAGHDLRYAIDPTPLRTELGWRPEHTDFESG
LRDTIAWYRDNESWWKPLKDAVESAYEGRRQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgctggtgaccggcggcgcggggttcatcggcgccaacttcgtgcgcagagcc
gtgcgtgaacgccccgacgtgcgcgtgacggtgctggattcgctgacctatgccggcagc
agggagtcgctgcgcgacgtcgaatccgagatccggctggtcgagggcgacatcaccgac
tccggcctcgtcggcgcgctggtcggcgaatccgacgccgtcgtgcactttgccgccgag
acgcacgtcgacaacgcgctggccgaccccgagccgttcgtccacaccaacgtcgtcggc
acgttcacgatcctggaggcggtccgccacgcgggcgtccggttgcaccacgtgtcgacc
gacgaggtctacggcgacctggaactcgacgacccggcccggttcaccgaggcgacgccc
tacaacccgtcgagcccgtactcgtcgaccaaagccgcagccgacatgctggtgcgcgcg
tgggtccggtcctacaagctggccgcgaccctgtccaactgctccaacaactacgggccc
tatcagcacgtggagaagttcatcccgcgccagatcaccaacgtgctcaccggccggcgg
cccaagctgtacggcaccggcgccaacgtgcgcgactggatccacgtcgacgaccacaac
cgtgcggtgtggcggatcctcaccgacggtgcgatcgggcgcacctacctgatcggcgcc
gacggcgaacgcgacaacctctcggtgatgcggacgatcctgcggctgatgggccgctcc
cccgacgacttcgaccacgtcaccgaccgggccggacacgatctgcgctatgccatcgac
cccaccccgctgcgcaccgagctgggctggcggcccgaacacacagacttcgaaagcgga
ctgcgcgacaccatcgcctggtaccgcgacaacgaatcatggtggaagccgctgaaagac
gcggtggaatcggcgtacgaagggcgacggcagtga
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