Mycolicibacterium vaccae: MYVA_1199
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Entry
MYVA_1199 CDS
T04356
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mvq
Mycolicibacterium vaccae
Pathway
mvq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYVA_1199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvq03021
]
MYVA_1199
03400 DNA repair and recombination proteins [BR:
mvq03400
]
MYVA_1199
Enzymes [BR:
mvq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYVA_1199
Transcription machinery [BR:
mvq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MYVA_1199
DNA repair and recombination proteins [BR:
mvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MYVA_1199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ANI38419
LinkDB
All DBs
Position
1231450..1232502
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEEVVAENRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PEMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADQAAHFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPASFDPSEVAGYDVATGTWNSDAGYDVDDNQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgccccaccctgagcgaagaggtcgtcgccgagaaccgctcccag
ttcgtcatcgaaccgctggagcccggtttcggttacaccctcggaaactcgctgcgtcgc
acgctgctgtcgtccattccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtccccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggcctcgtggtctcctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggacccggtgaggtcaccgcgggcgacatcgtcccgccggccggcgtcacggtgcacaac
cccgagatgcacatcgccaccctcaacgacaagggcaagctggaggtcgagctcgtcgtc
gagcgcggtcgcggctacgtgcctgccgtgcagaacaaggcctccggcgccgagatcggc
cgcatcccggtcgattcgatctactcgccggtgctcaaggtcacctacaaggtggaggcg
acccgcgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tcgatcaccccgcgtgacgcgctggcctcggccggcaagacgctggtcgagttgttcggt
ctggcacgcgaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgag
gccgatcaggccgcgcacttcgcgctgccgatcgacgacctggacctgacggtgcgttcc
tacaactgcctcaagcgtgagggtgtgcacaccgtcggcgagctggtcgcccgcacggag
tccgatctgctggacatccgtaacttcggtcagaagtccatcgacgaggtgaagatcaag
ctgcaccagctgggtctgtcgctcaaggacagcccggccagcttcgatccgtccgaggtc
gccggctacgacgtcgccaccggtacctggaacagcgatgccggctacgacgtggacgac
aaccaggactatgccgagaccgaacagctctag
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