Mycolicibacterium vaccae: MYVA_1417
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Entry
MYVA_1417 CDS
T04356
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mvq
Mycolicibacterium vaccae
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvq03021
]
MYVA_1417
Transcription machinery [BR:
mvq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYVA_1417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
HTH_Crp_2
MarR
HTH_3
Sigma70_ECF
MarR_2
DUF7343
HTH_IclR
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ANI38627
LinkDB
All DBs
Position
1451661..1452383
Genome browser
AA seq
240 aa
AA seq
DB search
MFRALAELEEGSAPFQRQRDRIVERCLPLADHIARRFDGRGEPRDDLVQVARVGLVNAVI
RFDVNAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGAATAELSQRLGRA
PTATELAAELEMDRDEVIEGLVAGSSYNTLSIDSGGSGNEDAPAIADTLGDVDLTLDQIE
NREALRPLLAQLPERERTVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLARLRDQLE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcgcgttggccgagctcgaggagggctcggcgcccttccagcgccagcgtgac
cgcatcgtcgagcgttgtcttccgttggccgatcacatcgcgcgccggttcgacggccgc
ggtgagccgcgcgacgacctggtccaggtggcccgcgtcggtctggtcaacgccgtgatc
cggttcgacgtgaacgccggttcggacttcgtgtcgttcgcggtgcccaccatcatgggc
gaggtccgccggcatttccgggacaacagctggtcggtgaaggtgccgcgccggctcaag
gagctgcacctgcggctgggcgcggccacggccgagctgtcgcagcggctgggtcgcgca
ccgacggcgaccgagctggccgccgagctggagatggatcgcgacgaggtgatcgagggc
ctggtcgcgggcagttcctacaacacgttgtcgatcgactccggcggcagcggcaacgag
gacgcccccgcgatcgccgacacgctcggtgacgtggacctgacgctggaccagatcgag
aaccgcgaggcactgcggccgctgctggcgcagctgcccgagcgggaacgcacggtgctg
gtgctgcggttcttcgagtcgatgacgcagacgcagatcgccgagcgggtcggcatctcg
cagatgcacgtctcccggctgctcgcgaagtcgctagcgcggctccgcgaccagcttgag
tga
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integrated database retrieval system
