Mycolicibacterium vaccae: MYVA_1552
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Entry
MYVA_1552 CDS
T04356
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvq
Mycolicibacterium vaccae
Pathway
mvq03420
Nucleotide excision repair
mvq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYVA_1552
03430 Mismatch repair
MYVA_1552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvq03400
]
MYVA_1552
Enzymes [BR:
mvq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MYVA_1552
DNA repair and recombination proteins [BR:
mvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYVA_1552
MMR (mismatch excision repair)
Other MMR factors
MYVA_1552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANI38756
LinkDB
All DBs
Position
1595356..1598565
Genome browser
AA seq
1069 aa
AA seq
DB search
MISAEPGPLVVIAGAGAGKTETMAARVVWLVANGYASPGEVLGLTFTRKAAGQLLRRVRA
RLARLAGAGLMLPAGADLADDPVTISTYHAFAGNLLREYGLLLPVEPDTRLLGETELWQL
AFQVVCEHPAALDTEKSPASITDMVLRLAGQLSEHLVDTAQLRDTHVELERLVLTLPAGR
YQRDRGPSQWLLRMLATQTERTMLVPLIDALHRRMRDERVMDFGMQMASAARLAEQCPQV
GEQLRQRYRVVLLDEYQDTGHAQRVALSSLFGGGADDGLALTAVGDPIQSIYGWRGASAT
NLPRFTTDFPFSDGTPAPTLELRTSWRNPPEVLHLANEVSVEARHRSVAVRALQPRPGAE
PGSVRCALLHDVETEREWVAEQIASRWHGGIDTDGAAPTAAVLVRRNADAGPMADALNRR
GVPVEVVGLAGLLAVPEVADVVAMLRLTADPTAGAAAVRVLTGPRWRLGARDVAALWRRA
ASLVDGGASSADADTATAQIVAALGPDADAACLADAICDPGPATAYSEPGHARIVALGRE
LTALRAHLDSPLPELLAEVRRLLGIDTEVRAAQPVSAGWSGTEHLDAFADVVTDFASRGA
TTVSALLAYLDIAEQVENGLAPAEVTVSAERVQILTVHAAKGLEWQIVAVPHLSGRIFPS
TASPRTWLTDAADLPPLLRGDCAAVSEHGVPVLDTSDVSDRKGLSDKIYDHKRSLDQRRT
DEERRLLYVAITRAEDTLLVSGHHWGATESKPRGPSQFLNELKDVIDASAADGTPCGIVD
VWTEAPADGESNPLRDRVVEAVWPADPLAGRRTHTDRGADLVATAMAAAPQPDQIPDVHG
WAADVDALLAERELAARRPAPRLPQQLSVSAMVELGRDPEAVAARLQRRLPRRPDAQALL
GTAFHEWVQRYFQAEKLFDLDDLPGAADADRDDRGELEELQNSFAVSPWAARTPVDVEVP
FDMMLAGRVVRGRIDAVFADDDGGVTVLDWKTGEPPATEEELRHNAVQLAVYRLAWARLH
GCPVSSVRAAFHYVRSGRTVMPEDLPDEEALTALLTEPSEEQEVAQLSR
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
gtgatctccgccgagccggggccgctggtggtgatcgccggtgccggggcgggcaagacc
gagaccatggcggcgcgggtggtgtggctggtcgcgaacggttacgcgagtccgggcgag
gtgctcgggctgaccttcacccgtaaagcggcgggtcagctgctgcgccgggtacgtgcc
cggctggcgcggctggccggggcgggcctgatgcttcccgcaggcgccgatctcgccgac
gatcccgtcaccatcagcacctaccacgcattcgcgggaaacctgttgcgcgagtacggt
ctgctgctgccggtcgagcccgacacccggctgctcggggaaaccgagttgtggcagctg
gcgttccaggtggtgtgcgaacatcccgccgcactggacaccgaaaagtcgccggcctcg
atcaccgacatggtgctgcggctggccgggcaactctccgagcatctggtcgacaccgcg
caactgcgcgacacccacgtcgaactggagcggctggtgctcacgctgccggccggccgg
tatcagcgtgaccgcggccccagccaatggctgttgcgcatgctggcgacccagaccgag
cgcaccatgctggtgccgttgatcgacgcgctgcaccgccggatgcgcgacgagagggtg
atggatttcggcatgcagatggcctccgcggcgcggctggcagagcagtgcccccaggtc
ggcgaacagttgcggcagcgttaccgggtggtgctgctcgacgagtaccaggacaccggc
cacgcccagcgggttgcgttgtcctccttgttcggtggcggcgctgacgacggtctggcg
ctgacggccgtcggggacccgatccagtccatctacggctggcgcggagcctcggcgacc
aacctgccgcggttcaccaccgatttcccgttctcggacggcaccccggcgccgactttg
gagctgcgcaccagctggcgcaacccgccggaggtgctgcacctggccaacgaggtgtcg
gtcgaggcccgtcaccgctcggtggcggtgcgcgcgctgcagccgcgcccgggcgccgaa
cccggcagtgtgcggtgtgcgctgctgcacgacgtcgagaccgaacgggaatgggtcgcc
gagcagatcgcgtcccgctggcacggcgggatcgacaccgacggcgccgcgccgacggcc
gcagtcctggtgcggcgcaacgccgatgccggaccgatggccgacgcgctgaaccgccga
ggtgtcccggtcgaggtggtcggactggccgggctgctggccgtgcccgaggtcgccgac
gtggtcgcgatgctgcggctgacggccgatccgactgccggcgcggccgcggtgcgggtc
ctgaccgggccgaggtggcggctgggtgcgcgcgacgtcgcggcgctgtggcgacgtgcg
gccagcctggtcgacggcggcgcctcctcagcggatgccgacacggcgaccgcgcagatc
gtcgccgcgctcgggcccgacgccgacgcggcgtgcctggccgacgcgatctgcgatccc
ggcccggccacggcgtactcggagccggggcacgccaggatcgtcgcgctggggcgtgag
ttgaccgcgctgcgggcccacctggacagcccgctgccggagctgctggcggaggtgcgg
cgtctgctcggcatcgacaccgaagtgcgggccgcgcagccggtctcggcgggatggtcg
ggcaccgaacacctcgacgcgttcgccgacgtggtgaccgatttcgcgtcgcggggcgcg
accacggtgtcggcgttgctggcctacctcgacatcgccgagcaggtcgagaacggcctg
gcgccggccgaggtcacggtgtccgccgagcgcgtgcagatcctgaccgtgcacgcggcc
aagggcctggaatggcagatcgtggcggtgccgcacctgtccggtcggatcttcccgtcc
accgcctccccgcgcacctggctcaccgacgccgccgacctgccgcccctgctgcgcggt
gactgcgcggcggtgtccgagcacggcgtgccggtgctcgacacctccgacgtcagcgat
cggaaagggttgtcggacaagatctacgatcacaagcgcagcctggaccagcgacgcacc
gacgaagaacgccgtctgctgtacgtggcgatcacccgcgccgaggacacgctcctggtg
tccggccaccactggggtgccaccgagtccaagccgcgcggcccgtcgcagttcctgaat
gagctcaaggacgtcatcgacgcgtccgcggccgacggaacgccgtgcggcatcgtcgac
gtgtggaccgaggcccccgccgacggggagtccaatccgttgcgggaccgggtcgtcgag
gccgtgtggccggcggatccgttggccggcaggcgcacgcacaccgaccgcggcgccgat
ctggtcgccacggcgatggcggccgcgccgcaacccgaccagatccccgacgtccacggc
tgggctgccgatgtcgacgcgctgctggccgaacgcgaactggctgcccgccgaccggca
ccgcgcctgccgcagcagctgtcggtcagcgcgatggtcgaactcgggcgtgaccccgaa
gcggtcgccgcgcggctgcaacgccggctgcctcggcggcccgacgcgcaggcgttgctg
ggtaccgctttccacgaatgggtgcagcgctacttccaggccgagaagctgttcgatctc
gacgacctgcccggggcggccgacgcggaccgtgatgaccgcggcgagctcgaggaacta
cagaactcgttcgcggtgtcgccgtgggcggcccgtaccccggtcgacgtcgaggtgcct
ttcgacatgatgctcgccgggcgggtggtgcgcggtcgcatcgacgcggtgttcgccgac
gacgacggcggggtcacggtgctggactggaagaccggcgagccacccgcgaccgaagaa
gagctgcggcacaacgctgttcagctcgccgtgtaccgactggcgtgggcgcgactgcac
ggatgtccggtgtcttcggtgcgtgcggcgttccactacgtgcggtccgggcgcacggtg
atgccggaagacctgcccgacgaggaggcgctgaccgcgctactgaccgagccgtccgag
gagcaggaggtggctcagctgtcgcggtag
DBGET
integrated database retrieval system
