Mycolicibacterium vaccae: MYVA_2419
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Entry
MYVA_2419 CDS
T04356
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mvq
Mycolicibacterium vaccae
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvq03021
]
MYVA_2419
Transcription machinery [BR:
mvq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYVA_2419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
MarR
HTH_23
HTH_10
HTH_33
KORA
DUF7343
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ANI39591
LinkDB
All DBs
Position
complement(2488290..2489141)
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AA seq
283 aa
AA seq
DB search
MQTIDQPKTIAPTITPTETIERRHTHKTRPRTNGAYDDVVDMFRELSALDPESVAYQRLR
EAIVERCLPLADHIARRFRGRGEAHEDLVQVARVGLLNAVNRFDVDAANDFLAFAVPTMM
GEVRRYFRDHGWSLKVPRRLKELNVRMNSAKSELTHQLNRAPTPSELAEYLGMDRAEIVE
GLVAANAYSTRSTEQETMLNGDGDGLTLLDTIGGPDENIQRVIDIQTVQPLLATLPARDR
LVLQLRFFDNRTQSQIAEQIGVSQMHVSRLLSRALATLRAQVG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacgatcgaccagcccaagaccattgcccccacgatcactccgaccgagacgatc
gagcgcaggcacacccacaagacccgtccccgcaccaacggcgcctacgacgacgtcgtt
gacatgttccgggagctgtcggcgctggaccccgaatccgtggcgtatcagcgcctgcgg
gaagccatcgtcgaacgctgcctcccgctggccgaccacatcgcgcgccgtttccgcgga
cgcggcgaagcgcacgaggacctggtccaggtcgcgcgagtcggcctgctcaacgccgtc
aacaggttcgacgtcgacgccgccaacgatttcctggcgttcgcggtcccgacgatgatg
ggcgaggtccggcgctacttccgcgaccacggctggtcgttgaaggttccccgccgactc
aaagaactcaacgtgcggatgaacagcgcaaagtctgaactcacccatcagctcaaccgg
gcgcccacgccgagcgaactcgcggagtacctcgggatggaccgggccgagatcgtggaa
ggcctcgttgcggcgaacgcctactccacccgctcaaccgagcaggagacgatgctcaac
ggtgacggcgacgggctcaccctgctggacaccatcggcggccccgacgagaacatccag
cgcgtcatcgacattcagaccgtgcaaccgctgttggccaccctgcccgcccgtgaccgg
ctggtgctgcaactgcgattcttcgacaaccgcacgcagagccagatcgccgaacagatc
ggcgtgtcgcagatgcacgtgtcgcggctgctgagccgcgcgctggccacgctgcgcgcc
caggtcggttga
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