Mycolicibacterium vaccae: MYVA_3899
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Entry
MYVA_3899 CDS
T04356
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mvq
Mycolicibacterium vaccae
Pathway
mvq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MYVA_3899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvq03019
]
MYVA_3899
03009 Ribosome biogenesis [BR:
mvq03009
]
MYVA_3899
Messenger RNA biogenesis [BR:
mvq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYVA_3899
Ribosome biogenesis [BR:
mvq03009
]
Eukaryotic type
Pre-60S particles
RNases
MYVA_3899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANI41009
LinkDB
All DBs
Position
4060284..4060919
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AA seq
211 aa
AA seq
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MRDELVWIDCEMTGLDLKSDLLIEIAVLVTDSELNILGEGLDVVIHADDDALSSMIDVVA
QMHTKSGLVEEVRASTVDVATAEDMVLTYIREHVKQAKTAPLAGNSIATDRGFIARDMPK
LDDFLHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRQTAFVA
PPGPSTSDIAAIAAELGPDSRRDSVPEDKSS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgacgaactggtatggatcgactgcgagatgaccggcctggacctcaagtccgat
ctgctcatcgagattgcggtgctcgtgaccgactcggaactgaatatcctgggcgagggc
ctcgacgtggtcatccacgccgacgacgacgcgttgtcgtcgatgatcgacgtcgtcgcc
cagatgcacaccaagtccgggctcgtcgaggaggtgcgcgcctcgaccgtcgacgtggcc
accgccgaggacatggtgctgacctacatccgggagcacgtcaagcaggccaaaaccgca
ccgctggcgggcaactcgatcgccaccgaccgcgggttcatcgcccgcgacatgcccaag
ctcgacgacttcctgcactaccggatgatcgacgtcagctcgatcaaggagctgtgccgg
cgctggtacccgcggatctacttcggtcagccggagaagggcctggcccaccgtgcactt
gccgacattcacgagtcgatccgcgagctcaagtactaccgccagacggccttcgtggcg
ccgcccgggccgtcgaccagcgatattgccgccatcgcggccgaactcggaccggattcg
cgccgcgattcggttccagaggacaagagcagctag
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