Mycolicibacterium vaccae: MYVA_4414
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Entry
MYVA_4414 CDS
T04356
Name
(GenBank) hypothetical protein
Organism
mvq
Mycolicibacterium vaccae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scabin-like
DUF3626
Pertussis_S1
Motif
Other DBs
NCBI-ProteinID:
ANI41502
LinkDB
All DBs
Position
complement(4606034..4611205)
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AA seq
1723 aa
AA seq
DB search
MDATLLDIDISALSGPDLVTLQKHQVFDWLISNHDAHPGQFLRTRDGGIVGIDKDQAFRY
FGRDILSWRFHPNGFYGEAEPVYNTMWRGFSQGRGDILLSDPRTGEVGEFITRLREFDDE
RLRDLLRPYAVGAAKAGKLLSTSGDEPGLTDQRHVENDVESFLSAVIERKSRLVEDFGSL
YQRALDARPDPQPAVASGAPRLSPQPSTRPVEDVRANVIEVPTVMVEGTFDTAEPVFSAD
RPSAQLDSTVALSDITLPQPFLRLHFRTDNHLLFRADTRGPSEIFESGFAPQQPSMRDFE
AFILGRSGAFVSTTRNPGLHFRVPFNTRPDVFEYIIDAPGGIEANPTLEDHPYTYQDEVS
FPGGIRRENIIGVERVWDTLTGHPGRTVRGTHEYEEFIANPRYDPSAPNTRIARRASADD
SDDNADDSDEDSSGALTPRAGSPVAPAPSHPALGGEASSDDDSDEDSSGALTPRAGSPVA
PAPSHPALGGEASSADDSDEDSSGALTPRAGSPVAPAPSHPALGGEASSDDDSDEDSSGA
LTPRAGSPVAPAPSHPALGGEASSDDDSDEDSSGALTPRAGSPVAPAPSHPALGGEASSD
DDSDEDSSGALTPRAGSPVAPAPSHPALGGEASSDDDSDEDSSGALTPRAGSPVAPAPPH
PALGGEASSDDDSDEDSSGALTPRAGSPVAPAPPHPALSGEDGVAGGESSAAPGPLARLA
DPGGEARHLIARVWRELPAGVADARGLTREDVDDSYVEFFRRWASRFRNEVELRAGFTSF
LLTGDPLVGLEGGARERLDSKGKGRATEADINDHIAEPPDTTRVPLPSIVFGVDDQPSRI
PSASEDKTDDPADDLAARQQALGLLAAGDVVGLQFAEDKAAGDGWKATVLDHLVGWGISS
PEQAQADLGTMITVLEQARVTINFKAHEWIQEFAGDFERAPESYLNSWERGLRPGGASTK
GVLDNVEKSTGGYLRSGRVAGQDADRIAAARIRIQTHLLDPKSDGFVAAGRPRYGAVDYA
RRTAGGAPAYGTSFFVVKEHVKHRALFVSADSFAAVGGRTTTTYSHIGKLLTHSAEGQLR
RLHQYATSSRPGRLTADDGVYFEAQLYTPVRFDRDVAEINVDMAELSSIDDETLSSTIAA
MQQFADRYGVKLVIRPWTLEVPFGEGSTSVAEDDDGVTRLVREIVKVAKARNAAGSLGLD
VHVEGGGNGSIGGRGAHASGLKRASAVGELIQRKLDVALPADRVSTSFVTVLQPTSRGSA
LRDGVTGPRAEARRRASVRVEKRPKPAVSTHVLMPFDERSQELSAAQRADLDRFAVALVQ
RARQVIADGGSGLIVNADGGGNGGRFSRGPVVVGTKRATAALNYLRAQIEKQPGGTPRAS
DLVTVSDRPTSRGADLKDELAHFDDNQQRRTVLLTVHPRPARRDLQDADGGTGRDLITEQ
PRAMASLPADAATRSDPADKVALLRDRGDTTPEFDGRSEDSDIYVTDDESEVQARADRGR
EPSRSADADAVTPAHSGFDAEDSPKESWVSTAADLPPSWRELKEQVAKALREYEAIRAEF
PELCDDDSDSNPSALELRDGEAVSLRVSGVGDGKSSPDPGSKQKSYSPASDYSPLLGGHS
SAGSGLGERSPSHAADSTSSASLRDAGVVLGGAAGSAWAGSSNGGRSGLPVTDQSEDRSM
GSSGNSRSSLSQSASGPGSNVHAGYLHLARKADPVANAGGAQE
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccacgttgctcgacatcgacatcagcgcgttgtcaggtccggatctggtgacc
ttgcagaaacatcaggtgttcgactggctgatcagcaatcacgacgcccaccctgggcag
ttcctgcggacacgcgatggcggcatcgtcggtatcgataaggaccaagcgttccggtac
ttcggtcgagacatattgagctggcgattccatcccaacggtttctacggtgaggccgag
ccggtttacaacactatgtggagagggttcagccagggccggggtgacatcttgttgtcc
gatccccgtaccggtgaggtcggcgagttcatcacgaggttgcgagagttcgacgacgag
cgactccgggatcttttgcggccctatgcggtgggcgctgccaaggccgggaaacttttg
agtacctcgggcgacgaaccggggcttaccgaccaacgacacgtcgaaaacgatgtggag
tctttcctgtccgcggtgatcgaacgtaagagccggttggttgaggatttcggatccctc
taccagcgggcccttgacgcgcggccggatccgcagcctgcggtcgcttcgggggctccg
aggctttcgccgcagccttcgacgcggcccgtcgaggatgtgcgggccaatgtcatcgag
gttccgacggtgatggttgagggcacgttcgacacggccgagccggtgttcagcgctgac
cgtcccagtgcgcaactagattccacggtcgcgctgtcggatatcaccttgccgcaaccg
ttcctgcggttgcactttcgcaccgacaatcatttgcttttccgcgctgatactcggggt
ccctcggagatcttcgaaagtggttttgcccctcaacaaccgagcatgcgcgatttcgaa
gccttcattctcggacgttctggagcttttgtatcgacgacccgaaatcccgggctccat
ttccgggttcccttcaacactcggcccgatgtcttcgagtacatcatcgacgcccccggc
ggcatcgaggccaacccgacactcgaggaccacccctatacctaccaagacgaggtttcc
ttccccggtgggatacgacgcgaaaacatcatcggcgtcgagcgggtatgggacacgctg
acggggcaccccggcaggacggtacggggaacacatgagtacgaggagttcatcgccaat
ccgcgctacgaccccagcgcacccaatacccggatagcgaggagggccagcgctgacgac
agcgacgacaacgctgacgacagtgatgaggacagcagtggtgcgttgactccgagagct
ggttccccagtcgcgcccgcaccgtcgcatccggcgttgggtggcgaggccagcagcgat
gacgacagtgatgaggacagcagtggtgcgttgactccgagagctggttccccagtcgcg
cccgcaccgtcgcatccggcgttgggtggcgaggccagcagcgctgacgacagtgatgag
gacagcagtggtgcgttgactccgagagctggttccccagtcgcgcccgcaccgtcgcat
ccggcgttgggtggcgaggccagcagcgatgacgacagtgatgaggacagcagtggtgcg
ttgactccgagagctggttccccagtcgcgcccgcaccgtcgcatccggcgttgggtggc
gaggccagcagcgatgacgacagtgatgaggacagcagtggtgcgttgactccgagagct
ggttccccagtcgcgcccgcaccgtcgcatccggcgttgggtggcgaggccagcagcgat
gacgacagtgatgaggacagcagtggtgcgttgactccgagagctggttccccagtcgcg
cccgcaccgtcgcatccggcgttgggtggcgaggccagcagcgatgacgacagtgatgag
gacagcagtggtgcgttgactccgagagctggttccccagtcgcgcccgcaccgccgcac
ccggcgttgggtggcgaggccagcagcgatgacgacagtgatgaggacagcagtggtgcg
ttgactccgagagctggttccccagtcgcgcccgcaccgccgcacccggcgttgagtggc
gaggatggggttgcaggaggtgagtcgtcggcggcaccggggccgttggcgcggttggct
gatccgggcggtgaggccaggcatttgatcgcgcgtgtgtggagggagttgcctgccggt
gttgctgatgcccggggtttgactcgggaggatgtcgacgacagctatgtcgagttcttc
aggcggtgggcttcgcggttcagaaacgaggtcgagctgcgtgctgggttcacgagtttt
ctgctgactggtgatcctctggtcggtttggaggggggcgctcgagaacgactcgacagt
aagggtaagggcagggccaccgaggccgacatcaatgaccatatcgctgagccccccgac
actacgcgagtcccattgccgtccatagtgttcggcgtcgacgatcagcccagccggatc
ccgagtgcatctgaggacaagacggatgatcccgctgatgacctggcggcgcggcagcag
gcgctgggattgttggcggcgggtgacgtcgtggggttgcagttcgccgaggacaaggcc
gcgggtgacggctggaaagctacggtgctggaccaccttgtcggatgggggatatcgagc
ccggaacaggcccaggctgatttgggcacgatgatcaccgtgctcgagcaggcacgggtg
acaatcaatttcaaggcacatgagtggattcaggagttcgccggcgattttgagcgggcg
cccgaaagctacctcaactcctgggagcggggattgcggccgggcggtgcctcgaccaag
ggcgtgctcgacaatgtcgagaaatcgacgggtggctatctccggtcaggtcgcgtggcg
ggccaggatgcggaccgaattgcggcggcgcgtattcgaattcagacacacctgctggat
ccgaagtccgacggcttcgttgcggctgggcggcccaggtacggcgccgtcgactatgcg
cgcaggacggccggcggcgctcccgcctacggcacgtccttcttcgtcgtgaaagaacac
gttaaacatcgtgcgttgttcgtctcggcggattccttcgccgctgtcggggggcgcact
acgacgacctactcgcacatcggtaagttgctcacgcatagcgcggagggccagctacgg
aggctgcatcagtacgcaacctcaagtcgtccgggtcggttgactgccgatgacggggtg
tacttcgaagcgcagctctatacgccggtcaggttcgatcgcgacgtcgccgagatcaat
gtcgacatggcagagctgagttcgatcgacgacgagaccctgtcctcaactattgccgca
atgcagcaattcgctgatcggtacggcgtgaagctggtcatccgcccgtggacgttggag
gtgcccttcggggagggctcgacatccgttgccgaggacgacgatggggtcacgcggctc
gtcagagagatcgtcaaggtggccaaggctcggaacgcggctgggagcctcggtctcgac
gtgcacgttgagggcggcggaaacgggagtatcggtggtcgcggcgcacatgcatctggc
ttgaagcgcgccagcgctgtgggagagctcatccaacgcaagctcgacgtcgcgcttcct
gccgatcgtgtgtccacctccttcgtcacggttcttcaacccacgtctcggggaagcgcg
ctgcgcgatggggtgaccgggccccgggccgaagcccgacggcgggcctccgtacgagtc
gaaaagcgacccaagccggctgtctcgactcacgtcttgatgccgttcgatgaacggtcg
caagaactcagcgccgctcagcgagccgatctggaccgcttcgccgttgccctggtccaa
agggcacgtcaggtgattgcagacggcggctctggactgatcgtcaacgcagacggcggg
ggtaacggcgggcgattcagccggggccctgtcgtcgtcggtacgaagcgcgccactgcg
gcgctgaactaccttcgcgcccagatagagaagcaaccaggcgggacccctcgagcctcc
gatctggtcaccgtcagcgacagacccacctcacggggagctgacctcaaagacgagcta
gctcatttcgacgacaaccaacaacggcgcaccgtcttgctcacagtgcacccacgccct
gcccgccgtgatctgcaggatgcagacggcggcaccggccgcgacctgattacggagcag
ccccgggcaatggcgtctctaccggccgacgccgccacaaggtccgaccccgccgacaaa
gtggcattgctgcgagaccgaggcgacaccacgcccgaattcgatggccggtccgaggat
tcagacatctacgtcaccgacgatgaatcagaagttcaggcgcgagccgatcgaggtcgc
gagccctcacggtcggccgatgccgatgcggtgacgccggcgcacagcgggttcgacgcc
gaagactcccccaaggagagttgggtgtcgacggctgccgatctgccaccgtcctggcgc
gaactcaaagagcaagtggcgaaagcgctacgggaatacgaggcgatcagagctgagttc
cccgaattgtgcgacgacgacagcgactcgaatccgtctgcgttggagctgagggatggc
gaggccgtctccttgcgggtttctggcgtcggcgacggcaagtcatcaccagatccgggg
tccaagcagaagtcgtactcgcctgcaagtgattactctccgctcctgggcgggcattct
tcggcgggttcgggcctaggggagcggtcgccatcccacgcggccgattcgacttcgtcg
gcttctctgcgcgacgctggtgtcgtcctgggcggtgccgcaggcagcgcctgggcgggg
tcgtcgaacgggggaaggtcggggttgcctgtgacggaccagtccgaggaccgctcgatg
gggtcatctggcaatagccggtcatcgctgtcgcagtctgcgtccggaccgggatcgaac
gttcacgccggctatctgcacctcgctcgcaaagcagatccagtcgcgaacgctggtggt
gcgcaggagtga
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