Mycolicibacterium vaccae: MYVA_5223
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Entry
MYVA_5223 CDS
T04356
Name
(GenBank) transcriptional regulator
KO
K22107
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
mvq
Mycolicibacterium vaccae
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvq03000
]
MYVA_5223
Transcription factors [BR:
mvq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MYVA_5223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_20
TetR_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ANI42275
LinkDB
All DBs
Position
5449234..5449941
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AA seq
235 aa
AA seq
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MSGTSDFAADKPQTPARATSGTASDSKPRQVMNVAVLAESELGSEAQRERRKRILDATLA
IASKGGYEAVQMRAVAERADVAVGTLYRYFPSKVHLLVSALGREFERIDAKTDRSAFPAG
ASAYQRLNIMVGKLNRAMQRNPLLTEAMTRAFVFADASAAGEVDHVGKLMDSMFARAMSD
GEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDGDQPKI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggacgtcggatttcgccgctgataagccgcagacgcctgcccgcgccacctcg
ggcacggcgtcggactccaaaccccgccaggtcatgaacgtcgcggtgctcgccgaatcc
gagctcggctccgaagcacagcgcgaacggcgcaaacgcatcctggacgccaccctggcg
atcgcgtccaagggcgggtacgaggcggtccagatgcgcgcggtggccgaacgcgccgat
gtcgcggtgggcacgctgtaccggtacttcccgtccaaggtgcacctgctggtctcggcg
ctgggacgcgagttcgaacgcatcgacgccaagaccgaccggtccgccttcccggccggc
gccagcgcctaccagcggctcaacatcatggtcggcaagctcaaccgggccatgcagcgc
aacccgctgctgaccgaggcgatgacgcgcgcgttcgtcttcgccgacgcgtccgccgcg
ggtgaggtagaccacgtcggcaagctgatggattcgatgttcgcccgcgcgatgagcgac
ggcgaacccaccgaggaccagtaccacatcgcgcgggtgatctccgacgtctggctgtcc
aacctgctggcctggctgacccggcgcgcctcggccaccgacgtcagcaagcgactggat
ctggccgtgcggctcctgatcggcgacggcgaccagcctaagatctga
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