Mycolicibacterium vaccae: MYVA_5286
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Entry
MYVA_5286 CDS
T04356
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mvq
Mycolicibacterium vaccae
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvq03032
]
MYVA_5286 (topA)
03400 DNA repair and recombination proteins [BR:
mvq03400
]
MYVA_5286 (topA)
Enzymes [BR:
mvq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MYVA_5286 (topA)
DNA replication proteins [BR:
mvq03032
]
Prokaryotic type
DNA Topoisomerases
MYVA_5286 (topA)
DNA repair and recombination proteins [BR:
mvq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MYVA_5286 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ANI42336
LinkDB
All DBs
Position
complement(5513942..5516779)
Genome browser
AA seq
945 aa
AA seq
DB search
MADEDRGSGKTGAEPRRGNGSTVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPR
AAADVPAKYKSEPWARLGVNVDADFEPLYIISPDKKATVADLKDKLKNVDELYLATDGDR
EGEAIAWHLLETLKPRIPVKRMVFHEITEPAIRAAAADPRDLDNDLVDAQETRRILDRLY
GYEVSPVLWKKVAPKLSAGRVQSVATRIIVQRERERMAFRSAGYWDVTAELDASVSDAQA
SPPRFTAKLNTVDGRRVASGRDFDSLGALKKPDEVLVLDEAGANGLAAGLRGAQLAVTSV
EQKPYTRRPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSQSA
IDAARNQARQLYGEEYVHPSPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSQLDTDEF
RLYELIWQRTVASQMADARGTTLSLRIGGTAAGGEQVVFNASGRTITFAGFLKAYVESLD
EQAGGEADDAESRLPNLTQGQRVDARDLTADGHTTSPPARYTEASLIKALEDLGIGRPST
YSSIIKTIQDRGYVHKKGSALVPSWVAFAVIGLLEQHFARLVDYDFTAAMEDELDAIAAG
NEQRTNWLNNFYFGGEHGVEGSIAREGGLKRLVGGNLEEIDAREVNSIKLFDDAEGRAIN
VRVGRNGAYLERMVEDPDNPGELKPQRANLKDELTPDELTLELAEKLFATPQEGRSLGVD
PESGHEIVAKDGRYGPYVTEVLPEPPDDGEAGATAKKGKKPTGPKPRTGSLFRSMDLETV
TLEDALKLLSLPRVVGVDPADNEEITAQNGRYGPYLKKGTDSRSLATEDQIFSITLDEAL
KIYAEPKRRGRQGAATPPLRELGVDPVSEKPMVIKDGRFGPYVTDGETNASLRKGDDVMT
ITDARASELLADRRARGPVKKKAAPKKVAKKAAKKAPAKKAAKKG
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgaggaccgcggcagcggcaaaactggcgccgaaccgcgcagaggcaacggt
tcgaccgtgcgacggctcgtcattgtcgagtcgcccaccaaggcgcgcaaaatcgcaggt
tatctggggtcgaactacatcgtcgagtcctcccgtgggcacatccgcgaccttcctcgt
gcggcggccgacgtccctgcgaagtacaagtcggagccgtgggcgcgcctgggcgtcaac
gtcgacgccgacttcgaaccgctctacatcatcagcccggacaagaaggccaccgtcgct
gatctgaaggacaagctcaagaacgtcgacgagctctatctggccaccgacggtgaccgc
gagggtgaggcgatcgcctggcacctgctggagacgctgaagccgcgcatcccggtcaag
cggatggtgttccacgagatcaccgaaccggcgatccgggcggccgcagcagacccccgc
gatctggacaacgacctggtcgacgcccaggagacccgccgcatcctcgaccgcctctac
ggctacgaggtcagccccgtgctgtggaagaaggtcgctccgaagctgtcggccggccgg
gtgcagtcggttgcgacgcgcatcatcgtccagcgcgaacgcgagcggatggcgttccgc
agcgccggctactgggacgtcaccgccgaactggacgccagcgtctccgacgcgcaggcg
tccccgccgaggttcaccgccaagctcaacacggtcgacgggcgccgggtggccagcggc
cgcgatttcgactccctcggcgcgctcaagaagcccgacgaggtgctcgttctcgacgag
gccggcgccaacggtctggctgccggcctgcgcggggcgcagctcgcggtcacctcggtg
gagcagaagccgtacacccgccgtccgtacgcgccgttcatgacctcgacgttgcagcag
gaggcgggccgcaagctgcggttctcgtcggagcgcacgatgagcatcgcgcagcggctg
tacgagaacggctacatcacctatatgcgtaccgactcgacgaccttgtcgcagtcggcc
attgacgccgcacgcaaccaggcccgccagctctacggcgaggagtacgtgcacccgtcg
ccgcgccagtacacccgcaaggtgaagaacgcgcaggaggcccacgaggccatccgcccg
gcaggcgacgtattccagacccccggccagctgcacagccagctcgacaccgacgagttc
cgcctctacgagctgatctggcagcgcaccgtcgcatcccagatggccgacgcgcgcggc
accacgctgagcctgcgtatcggcggcaccgcggcgggcggcgagcaggtggtgttcaat
gccagcggccgcacgatcacgttcgcgggcttcctcaaggcctacgtggagagcctcgac
gagcaggccggaggcgaggccgacgatgccgagagccggttgccgaacctgacccagggc
cagcgcgtcgacgccagggacctgaccgccgacggccacaccacctcgccgccggcgcgc
tacaccgaggcctcgctgatcaaagcgctggaggatctcgggatcgggcggccgtcgacg
tacagctcgatcatcaagacgatccaggaccgcggctacgtgcacaagaagggcagtgcg
ctggttccgtcctgggtggcgttcgccgtgatcgggttgctggagcagcatttcgcacgc
ctggtcgactacgacttcaccgccgcgatggaagacgagctggacgcgatcgccgcgggt
aatgagcaaaggaccaactggctcaacaacttctacttcggtggtgagcacggcgtcgaa
ggttcgatcgcccgcgagggcggcctcaagcggctggtgggcggcaacctcgaagagatc
gacgcacgagaagtcaactccatcaagcttttcgacgacgccgagggtcgcgcgatcaac
gtccgggtgggccgcaacggtgcctacctcgagcggatggtcgaagacccggacaacccg
ggcgagctgaagcctcagcgcgccaatctcaaagacgagctgacccccgacgagctgacc
ctggagctggccgaaaagcttttcgccacaccgcaggagggccggtcgctgggtgtcgac
ccggagtccgggcacgagatcgtcgccaaggacggccgctacggtccgtacgtcaccgag
gtgctgccggaacccccggacgacggtgaagccggcgcgaccgccaagaagggcaagaag
ccgacgggcccgaagccgcgcaccggttcgttgttccggtcgatggacctggagacggtg
acgctggaggatgcgctcaagctgctgtcgctgccgcgggtggtcggggtcgacccggcg
gacaacgaggagatcaccgcgcagaacggccgctacggcccgtacctgaagaagggcacc
gactcccggtcgctggccaccgaggaccagatcttctccatcacgctcgacgaggcgctc
aagatctacgccgagccgaaacgccgcgggcgtcagggcgcggccaccccgccgctgcgc
gagctgggcgtcgacccggtgtcggagaagccgatggtgatcaaggacggccgcttcggg
ccgtacgtcaccgacggggagaccaacgcgagcctgcgcaagggcgacgacgtcatgacg
atcaccgatgcgcgcgcgtccgagctgctggccgaccgccgtgcccgcggtccggtgaag
aagaaggccgccccgaagaaggtggccaagaaggctgccaagaaggccccggcgaagaag
gccgccaagaagggttag
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