Mycolicibacterium vaccae: MYVA_5400
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Entry
MYVA_5400 CDS
T04356
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mvq
Mycolicibacterium vaccae
Pathway
mvq03030
DNA replication
mvq03430
Mismatch repair
mvq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYVA_5400
03430 Mismatch repair
MYVA_5400
03440 Homologous recombination
MYVA_5400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvq03032
]
MYVA_5400
03400 DNA repair and recombination proteins [BR:
mvq03400
]
MYVA_5400
Enzymes [BR:
mvq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYVA_5400
DNA replication proteins [BR:
mvq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYVA_5400
DNA repair and recombination proteins [BR:
mvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYVA_5400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ANI42444
LinkDB
All DBs
Position
complement(5630827..5631765)
Genome browser
AA seq
312 aa
AA seq
DB search
MVDVETSGFRPGQARIVSVAALALSDDGNVEKSLYSLLDPGVDPGPTHVHGLTAEMLAGQ
PTFGDVVGDLCELLRGRTLVAHNVGFDYSFLTAEAEMVHAELPVDTVMCTVELARRLQLG
LDNLRLETLAAHWGVTQMNPHDALDDAMVLAQILKPVLVRAQERRKWLPVHPVGRRTWPN
GRVTHDEFRPLKALAARMPCAYANPGRFSPDRPLVQGMRIALSAEVGHTHEELVERILHA
GLAYTEAVDTHTSLVVCDDPAPEQGKGYQAGELAVPLLGSADFVARLDAVIGGATIEEFT
EPPPAGDQFSLF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatgtcgagacctcaggtttccgcccgggacaggcgcgcatcgtcagcgtcgcg
gcactggcgctcagcgacgacggcaacgtcgagaagagcctctacagcctcctcgatccc
ggtgtcgaccccggcccgacccacgtgcacgggctgaccgccgagatgctcgccggccag
cccaccttcggcgatgtcgtcggtgatctgtgcgagctgttgcgggggcgcacgctggtc
gcccacaacgtcggattcgactactcgttcctgaccgccgaggccgagatggtgcacgcc
gagctacccgtggacaccgtgatgtgcaccgtcgagctggcccgccggcttcagctcggg
ctggacaacctgcggctggagacgctggccgcgcactggggcgtcacccagatgaaccct
catgacgcgctcgacgacgcgatggtgctggcccagatcctcaagcccgtgctggtgcgc
gcccaggagcggcgcaagtggctcccggtgcatccggtcgggcggcgcacctggcccaac
ggccgggtcacccacgacgagttccgtccgctcaaggcactcgcggcgcggatgccgtgc
gcctacgccaacccgggccgcttctcgccggaccgtccgctggtgcagggcatgaggatc
gcactgtcggccgaggtcggccacacccatgaggaactcgtcgagcggattctgcacgcg
ggcctcgcctacaccgaggccgtcgacacgcacacctcgctggtggtctgcgacgacccc
gcccccgaacagggcaagggctaccaggccggcgagctcgccgtcccgctgctgggcagt
gccgacttcgtcgcgcgactggacgcggtgatcggcggcgcgacgatcgaggagttcacc
gaaccaccgccggccggggaccagttcagcctgttctga
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