Mannheimia sp. USDA-ARS-USMARC-1261: X781_11310
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Entry
X781_11310 CDS
T03026
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvr03016
]
X781_11310
Enzymes [BR:
mvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
X781_11310
Transfer RNA biogenesis [BR:
mvr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
X781_11310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AHG73279
UniProt:
W0Q2Y8
LinkDB
All DBs
Position
complement(1144441..1146456)
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AA seq
671 aa
AA seq
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MKEGLFIYKRIQNMFQDNPLLAQLKQQIEASKEYVEGTVKASDKAFGFLECDKKSYFIPP
MEMKKIMHGDLVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVDHPSIK
QNIPANTHKKVTEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKEGDNFAPWWVTLAR
HEQPREPVANEKSYELHDELAREDLTHLYFTTIDSPSTQDMDDALYIEPIKENDVQTGWR
LVVAIADPTAYIPENSNIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALV
SFIETDLEGNFTKDATFTSAWIESKDRLAYDNVSDYLEGATNAWQPESEETKQQIDLLHQ
FTQARIQWRAKNALLFKEQGDYTFELNEDGSVKDIHIEYRRIANQMIEESMIIANISCAK
FLSQNAQTGVFNTHSGFDPKNYELVKSFLLQTLATDENRDELAERYSAERLATLEGYCEM
QRDIQDFPEKFLELRLRRYLTFAEFKSEVAPHFGLGISHYATWTSPIRKYGDMVNHRLIK
QVLLGKQASTVEESVLTRLQEARRQNRLVERDIADWLYARYLFPMVEQAVEFECEIADVS
RGGLRAKVIQNGAQIFVPFSTLHDNKDEMEYRQEELAIYIKGEKVYQIGQEVKVKLTEVR
LETRSIVGNII
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagagggcttgtttatttataaaagaattcaaaatatgtttcaagacaatcctctt
ttagctcaactcaaacaacaaattgaagcaagcaaagaatatgtagaaggcacagttaaa
gcctctgataaagcatttggttttttagaatgcgataaaaaaagctatttcattccaccg
atggaaatgaaaaaaataatgcacggcgatttagtcaaagcggtggtaaaacgtgatggc
gataaagaacaagtagaaattgactccctgcttgaacctatgcttgacagatttattgct
caagtgcgtttaaataaagaaggaaaattgcaattagcagtcgatcacccaagcatcaag
caaaatatccctgcgaatacacacaaaaaagtaaccgaaaaattagaaaatggcgattgg
gttgttgcacaacttaaaacacaccctttgcgtgatgaccgttttttctttgcccaagta
actcaatttatttgtaaagagggcgataattttgccccttggtgggtaacacttgcacgc
cacgagcagccccgtgaacctgttgccaatgaaaaaagctacgaattgcacgatgaatta
gcccgtgaagatttaactcatctttacttcaccacgatcgatagcccaagcacacaagat
atggacgatgcattatacattgagccaatcaaagaaaatgatgttcaaacaggctggcgt
ttagtcgtagcaattgctgatccaaccgcttatatccctgaaaattctaacatcgagaaa
gcggctcgccaacgctgtttcacaaactatttaccgggctttaatattccaatgttacca
cgtgagttatctgatgatctctgctcgcttgtgccaaatgaaaaacgcccggcattagtt
tcttttattgaaacggatttggaaggcaacttcactaaagatgcaacctttacctctgct
tggattgagtcaaaagacaggctggcttatgacaatgtatctgactaccttgaaggtgca
acaaatgcgtggcaaccagagtcagaagaaaccaaacaacaaatcgacttattacatcaa
tttacgcaagcccgcattcaatggcgtgcaaaaaatgcccttttattcaaagaacaaggc
gattatacctttgaattaaatgaagatggctcggtgaaagatattcacattgaatatcgt
cgcattgcaaatcagatgattgaagaatcaatgattatcgccaatatcagttgtgccaaa
ttcttaagccagaacgcacaaacaggcgtatttaacactcactcaggttttgatccgaaa
aactatgaattggtaaaatcatttttgcttcaaaccttagcgacagatgaaaatcgtgat
gaactagcggaacgctactcagccgaacgtttagcaacactagaaggctattgtgaaatg
cagcgtgatattcaagatttcccggagaaattcttagaacttcgcttacgccgatatctc
acttttgcagaatttaaatctgaggttgctccacattttggcttaggtatcagccactat
gccacttggacatcaccaatccgtaaatatggcgatatggtaaatcaccgtttaatcaag
caagtgttgttaggcaaacaagcttcaactgtggaagaaagcgtactcactcgtttgcaa
gaagcccgtcgccagaaccgcttggtagaacgtgatattgccgattggctctacgcccgc
tacctgttcccgatggtagaacaagcggtcgaatttgagtgcgaaattgcagatgtttct
cgcggtggcttacgtgccaaagtcattcaaaatggggctcaaatttttgttccattctca
acgttacacgacaataaagatgaaatggaataccgccaagaagaactggcaatttacatc
aaaggcgaaaaagtctaccaaatcgggcaagaggttaaagtgaaactcaccgaagttcgc
ttagaaacacgttcgattgtggggaatatcatctaa
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