Mannheimia sp. USDA-ARS-USMARC-1261: X781_12860
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Entry
X781_12860 CDS
T03026
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvr03032
]
X781_12860
03036 Chromosome and associated proteins [BR:
mvr03036
]
X781_12860
03400 DNA repair and recombination proteins [BR:
mvr03400
]
X781_12860
DNA replication proteins [BR:
mvr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
X781_12860
Chromosome and associated proteins [BR:
mvr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
X781_12860
DNA repair and recombination proteins [BR:
mvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
X781_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
BD_b_sandwich
Spectrin_7
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AHG73434
LinkDB
All DBs
Position
complement(1303206..1303487)
Genome browser
AA seq
93 aa
AA seq
DB search
MTKSELIESLVAKNPNLQIKTVENCVKEILEHLTLTLEKGERIEVRGFGSFSLHYRQPRV
GRNPKTGDSVALSGKYVPHFKAGKDLKERVDLI
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgagagtttagtggctaaaaatccaaatttacagattaaa
acagtagagaattgtgtaaaagagattttagagcatttaacactaacattagaaaaaggc
gagagaattgaggtgagaggctttgggagtttttcattacattatcgccagcctcgtgta
ggacgaaatcctaaaacaggagacagtgtcgcattatccggaaaatatgtccctcatttt
aaagcaggtaaagatttaaaagagcgtgtggacttaatttaa
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