Mannheimia sp. USDA-ARS-USMARC-1261: X781_13680
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Entry
X781_13680 CDS
T03026
Name
(GenBank) Helix-turn-helix-domain containing protein AraC type
KO
K02099
AraC family transcriptional regulator, arabinose operon regulatory protein
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvr03000
]
X781_13680
Transcription factors [BR:
mvr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
X781_13680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
AHG73516
UniProt:
W0Q4P3
LinkDB
All DBs
Position
1395152..1396009
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AA seq
285 aa
AA seq
DB search
MYKNLSLLSPNTSFDFELAVGLTQCEKGNYLDSVVNKQGMNGYMLQLTTFGSGTIFDGKN
TFNVNRGQLLLFSPNVIQNYQRHSESLYWHYKWIYFLPNPKWNKWLNWSNKEAGIGRIKI
NDNRYFQEISQLFSKIELELKSSHFFKEDVATTLLEYLLMKCISAEKIEVIPAIDQRILN
VCNLILSNLSRNDSVEYIAEKVFLSPSRLSHLFKASLGINLVQWRELQRIAESKKLLYFS
NVSILNIAKSLGYEDPLYFSKIFKKHTGLSPSEFRTIERRKDNEV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaacctctctctactttcgccaaatacctcctttgactttgagctagctgtc
ggattgactcaatgcgaaaaaggaaattatcttgattctgttgtcaataaacaaggtatg
aatggctatatgttacagctgacaacttttggtagtggcacaatttttgacggaaaaaat
acgtttaatgtgaatcgaggacaacttcttctcttttctccaaatgtgattcaaaattac
caacgtcattctgagtccctatattggcactataaatggatctattttttaccaaatcct
aaatggaataaatggttaaattggtctaataaagaagcaggaattggtcggataaaaatt
aatgacaatcgatatttccaagaaatcagccagcttttttctaaaattgagcttgaatta
aaatctagccacttttttaaagaagatgtggcgacaactctattggagtatttattgatg
aagtgtatttccgcagagaaaattgaggttataccagccattgatcaacgtattcttaat
gtttgtaatttaatcttgtctaatttatcccggaatgacagtgtagaatacatagcagaa
aaggtatttttatctccctctcgactatctcacttatttaaagcatctctaggcattaat
ttagttcaatggagagaactacagcgtattgcagaatcaaaaaaactattatatttctct
aacgtttcaatattaaatatcgctaaatcattgggctatgaagacccgttgtatttttct
aaaatcttcaaaaagcacaccggattatccccttctgaatttagaactatcgaaagacgt
aaagataacgaagtgtga
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