Mannheimia sp. USDA-ARS-USMARC-1261: X781_13800
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Entry
X781_13800 CDS
T03026
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvr03016
]
X781_13800
Enzymes [BR:
mvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
X781_13800
Transfer RNA biogenesis [BR:
mvr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
X781_13800
Prokaryotic type
X781_13800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHG73528
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All DBs
Position
complement(1411773..1412696)
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AA seq
307 aa
AA seq
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MSRPRKRGRDIHGVFLLDKPQGMSSNDVLQKVKRIFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYLVTAKLGERADTSDAEGEIVETREVNVTKSDILATLGQFRGDIL
QVPTMFSALKHNGKPLYEYARAGITIEREARPITIFELNFIEYNAPFLTLEVHCSKGTYI
RTLIDDLGEVLGCGAHVTMLRRTSVANYPIDKMISYADLQKLAENQPLAELDCHLLPMDT
AVSNLIKINLTEQQTKAVGFGQRVRFDNPNQIYGLVRLYSDNAQFLGVAEVTCDNVIRPN
RMINLTE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagacctcgtaagcgtggtcgtgatattcacggcgtttttttattagataaaccg
cagggaatgtcgtcaaacgatgttctgcaaaaggtaaaacggattttccaagccaacaaa
gcggggcataccggggcgttagatcctttggcaacaggtatgctgccgatttgtttaggc
gaagcaactaagttttctcagtttttattagactctgataaacgttatcttgttaccgct
aaattaggcgaaagagcagatacttccgatgcagaaggggaaatcgttgaaaccagagaa
gtaaatgtaacaaaatcggatattttagcaactttagggcaatttagaggcgatattctg
caagtgccgacaatgttttctgccttaaaacataacgggaaaccgctttatgaatatgca
agagcagggattactattgagcgtgaagcacgcccgattacgatttttgagctgaatttt
attgagtacaatgcaccgtttttaacgttagaagtgcactgctcaaaaggcacttacatt
cgtacccttattgatgatctaggcgaagtgcttggttgtggggctcacgttactatgcta
cgtcgaacctctgtagcgaattatccgattgataaaatgataagctatgcagatttgcaa
aagttagcggaaaatcaaccgcttgcagagttggattgccatttattaccaatggataca
gcggtatcaaacctcattaaaataaatttaactgaacaacaaactaaagctgttggtttt
ggtcaaagagttaggtttgacaatcctaatcaaatttatggtttggtgcgtctatattcc
gataatgcacaatttttaggtgtggcagaggttacttgtgataatgtaattcgtcctaac
cgaatgattaacttaacagaatag
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