Mannheimia sp. USDA-ARS-USMARC-1261: X781_15430
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Entry
X781_15430 CDS
T03026
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Pathway
mvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X781_15430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvr03019
]
X781_15430
03110 Chaperones and folding catalysts [BR:
mvr03110
]
X781_15430
03029 Mitochondrial biogenesis [BR:
mvr03029
]
X781_15430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvr04147
]
X781_15430
Enzymes [BR:
mvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
X781_15430
Messenger RNA biogenesis [BR:
mvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
X781_15430
Chaperones and folding catalysts [BR:
mvr03110
]
Heat shock proteins
HSP60 / Chaperonin
X781_15430
Mitochondrial biogenesis [BR:
mvr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
X781_15430
Exosome [BR:
mvr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
X781_15430
Exosomal proteins of other body fluids (saliva and urine)
X781_15430
Exosomal proteins of breast cancer cells
X781_15430
Exosomal proteins of colorectal cancer cells
X781_15430
Exosomal proteins of bladder cancer cells
X781_15430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
DUF5891
Motif
Other DBs
NCBI-ProteinID:
AHG73690
UniProt:
W0Q766
LinkDB
All DBs
Position
1589236..1590876
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDRAYGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAVVEELKVISKPCETSKEIEQVGTISANSDSTVGQLIAQAMEKVGKEGVITVEDG
TGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENPYILLVDKKVSNIRELLPVLEGV
AKAGKPLVIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEELGQAKRVVISKDNTTIIDGIGDETQIKGRVAQIRQQIEDSTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVAMKEKKDRVDDALHATRAAVEEGIVPGGGVALV
RAATKVAVTLKGDNEEQNVGIKLALRAMEAPLRQIVANAGEESSVVARNVKDGSGNYGYN
AGTEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKEEKLDPAAMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaagacgttaaatttggtaatgatgcacgcgtaaaaatgttaaaaggcgtg
aatattttagctgatgcagtaaaagtaactttaggtccgaaaggtcgtaatgtggtatta
gaccgtgcatacggtgctccaacaattactaaagatggtgtatcggttgctcgtgaaatc
gaattagaagataaatttgaaaatatgggtgctcaaatggtgaaagaggttgcctctaaa
gccaatgatgccgccggtgatggtacaacaactgcaacggtattagctcaagcgatcgta
aatgaaggcttgaaagcggttgcagccggtatgaacccaatggatttaaaacgtggtatc
gataaagcagttgccgcagttgttgaagaattaaaagtgatttcaaaaccgtgtgaaact
tccaaagagatcgagcaagtgggaacaatttctgcaaactcagattcaactgtcggtcaa
ttaattgctcaagcaatggaaaaagtgggcaaagagggcgtaattactgttgaagacggc
acaggtttagaagatgcgttagatgtggttgaaggtatgcagtttgatcgcggctactta
tcaccatatttcatcaataaacctgaagctggcacagtagagttggagaatccgtacatt
cttttagtggataaaaaagtgtctaacatccgtgaattattaccggtgttagagggtgtt
gcgaaagcgggcaaaccgttagtgattattgcagaagatatcgaaggtgaagcgttggct
actttagtggtgaacacaatgcgtggtatcgtgaaagtggctgcggtgaaagcaccagga
tttggcgatcgccgtaaagcgatgttacaagatattgcgatcttaactgcaggtactgtg
atttcggaagagatcggtatggagcttgaaaaagcaactttagaagagttaggtcaagca
aaacgtgtggtgatctctaaagataacacaacgattattgacggcattggtgatgaaact
caaattaaaggtcgtgtagcacaaattcgtcagcaaatcgaagattcaacgtcagattac
gacaaagaaaaactgcaagagcgtgtggcgaaattagcaggcggtgttgctgtgattaaa
gttggtgcagcaacagaagtggcaatgaaagagaagaaagatcgtgttgatgatgcctta
cacgcaactcgtgcagcggtggaagagggtatcgtcccaggcggcggcgtggcattagtg
cgtgcggcaaccaaagtagcggtaaccttaaaaggcgacaatgaggaacaaaatgtgggt
atcaaacttgcccttcgtgcgatggaagcacctttacgccaaatcgtagcaaatgccggt
gaagagtcttcagtggttgctcgcaacgtgaaagatggttcgggtaactatggttataat
gcaggtacagagcagtatggcgatatgttagaaatgggtattttagatccaactaaagta
acccgttcagcattacaatttgcggcttctattgcaggtttaatgatcacgacagaatgt
atgatcacagacttaccaaaagaagaaaaattagatccagctgcaatgggcggtatgggt
ggaatgggcggaatgatgtaa
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