Mannheimia sp. USDA-ARS-USMARC-1261: X781_2620
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Entry
X781_2620 CDS
T03026
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvr03009
]
X781_2620
Enzymes [BR:
mvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
X781_2620
Ribosome biogenesis [BR:
mvr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X781_2620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHG72411
LinkDB
All DBs
Position
276874..277836
Genome browser
AA seq
320 aa
AA seq
DB search
MTTEKVISAGVQFFSINEDEAGQRLDNFLLAKLKGVPKSLIYRIVRKGEVRVNKGRIKPE
YKLQAEDVVRVPPVRVAEKNEAPISTKLNKVAELEDQILYEDEVMLVINKPSGIAVHGGS
GLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRSLHEQLREKVVQKDYL
ALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKPSETRFSIEERYANATLVKASPV
TGRTHQIRVHTQYAGHPIALDDKYGDNEFDSKMKEVGLHRLFLHAYSIRFEHPKSGEEMV
ITAPLDKTLKGVLAKLRAEK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagaaaaagtaattagtgccggcgttcagtttttttctatcaatgaagatgaa
gccgggcagcgtttagataattttttattagccaaactcaaaggtgtgccgaaaagtttg
atttaccgtattgtgcgtaaaggtgaggtacgggtaaacaaaggccgaatcaagccggaa
tataagttacaggcagaagatgtcgtgcgtgtgccgcctgtgcgtgtagccgagaaaaac
gaagcccctatttctaccaaactgaataaagtagcggaattggaagatcaaattctgtat
gaagatgaagtgatgttggtgatcaacaagccctcaggcattgcggtacacggtggtagc
ggtttgagttttggcgtaattgaggcattacgagcattacgcccgcaagctcgctttcta
gaactggttcaccgaattgaccgtgatacttcgggcattttgttggtagccaaaaaacgc
tcggctttacgtagcctgcacgaacaactgcgtgaaaaggtggtgcaaaaagattacttg
gcattagtgcgtggtcagtggcaagctcacaccaaagtgattaaagctccgttgctgaaa
aacgaattggcaagtggtgaacgcattgtgcgagtgagcgaagagggcaaaccttcagaa
actcgctttagtattgaagagcgttatgcaaatgcaactttggtgaaagcctcgccggtt
acaggcagaacccaccaaatccgtgtgcatactcaatacgcaggtcacccaatcgcctta
gacgacaaatatggcgacaatgaatttgatagcaaaatgaaagaagtcggtttgcaccgc
ttatttctacatgcttattctattcgttttgaacacccgaaaagtggggaagagatggta
attaccgcacccttggacaaaacattaaaaggcgtattagcaaaattaagagctgaaaag
tag
DBGET
integrated database retrieval system
