KEGG   Moritella viscosa: MVIS_0038
Entry
MVIS_0038         CDS       T03770                                 
Symbol
rho
Name
(GenBank) transcription termination factor rho
  KO
K03628  transcription termination factor Rho
Organism
mvs  Moritella viscosa
Pathway
mvs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MVIS_0038 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mvs03021]
    MVIS_0038 (rho)
   03019 Messenger RNA biogenesis [BR:mvs03019]
    MVIS_0038 (rho)
Transcription machinery [BR:mvs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MVIS_0038 (rho)
Messenger RNA biogenesis [BR:mvs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MVIS_0038 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 OB_RNB AAA_22 S1CSD-TOTE-2 Mor AAA
Other DBs
NCBI-ProteinID: CED58080
UniProt: A0A090I8C3
LinkDB
Position
1:49067..50332
AA seq 421 aa
MNLTELKNTPVSELVKLGESMGLENLARLRKQDIIFSILKAHAKSGEDIFGNGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVGGKIRPPKDGERYFALLKIDQVN
FDRPENSRNKILFENLTPIHPNERLRLERGNGSTEDITSRILDLSAPIGKGQRGLIVAPP
KAGKTMLLQNIASSIALNHPDATLMVLLIDERPEEVTEMQRLVRGEVIASTFDEPANRHV
QVAEMMIEKAKRLVEHKKDVIILLDSVTRLARAYNTVTPSSGKILSGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNQELHLNRKIAERRVYPAIDF
TRSGTRREELLADKAELQKMWILRKIVHPMGEIDAMEFLIDKLAMTKTNDQFFEAMKKQK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatttaaccgaattaaaaaacacaccagtttctgaacttgtaaaactgggcgaatct
atgggtctagaaaatctggctcgcttaagaaaacaagacatcattttttctatcttaaaa
gctcacgcaaaaagcggtgaagacatttttggtaatggtgttttagagattttgcaggat
ggctttggtttcttgcgttcagcagacagctcttatcttgccggccctgatgatatttat
gtctcgccaagtcagatccgtcgctttaacttgcgaacgggtgataccgttggtggtaaa
atccgcccgccaaaagatggcgaacgatattttgccttgttaaagattgaccaagttaac
tttgaccgccctgaaaactctcgtaataaaatcctctttgaaaaccttactccaatccat
ccaaatgaacgtcttcgtttagaacgtggtaatggcagtaccgaagatatcacttcgcgt
attcttgatttaagtgcaccgattggtaaaggtcaacgtggtttaattgtggcaccaccg
aaagctggtaaaacaatgctattacaaaacattgcctcttcaattgcgttaaatcatcct
gacgcgacattgatggttctgcttatcgatgaacgtccggaagaagtaacagagatgcag
cgtttggttcgtggtgaagtaattgcttcaacatttgatgaacctgctaaccgacatgtg
caagttgcggaaatgatgatcgaaaaagcgaaacgtcttgtcgagcacaagaaagacgtg
atcatcttacttgattctgtaacgcgtctagcacgtgcttacaatacagtgacaccgtca
tcaggtaagattttatctggtggtgttgatgcaaacgctttacaccgtccgaagcgtttc
ttcggtgctgcacgtaatgttgaagaaggtggttctttaactattatcgcaacagcattg
attgatactggttcgaaaatggatgaagtaatttacgaagaatttaaaggtactggtaac
caagagttacaccttaatcgtaaaattgcagaacgtcgtgtttatcctgcgattgacttc
actcgttcaggtacgcgtcgtgaagaactgttagcagataaagctgagttacagaaaatg
tggatcctacgtaaaatcgtgcacccaatgggtgagattgatgcgatggaattcctgatt
gataaactggctatgacgaaaacgaatgatcaattcttcgaagcaatgaagaagcaaaaa
tcataa

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