Moritella viscosa: MVIS_0182
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Entry
MVIS_0182 CDS
T03770
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mvs
Moritella viscosa
Pathway
mvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MVIS_0182 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvs03400
]
MVIS_0182 (recD)
Enzymes [BR:
mvs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MVIS_0182 (recD)
DNA repair and recombination proteins [BR:
mvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MVIS_0182 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
Helicase_RecD
UvrD-helicase
AAA_22
CbiA
SLFN-g3_helicase
nSTAND3
AAA_16
UvrD_C
NTPase_1
AAA_24
AAA_28
Mg_chelatase
TrwB_AAD_bind
T2SSE
DUF87
Motif
Other DBs
NCBI-ProteinID:
CED58218
LinkDB
All DBs
Position
1:210787..212814
Genome browser
AA seq
675 aa
AA seq
DB search
MSVLQCLKELANENKIRQLDYQFARFISNYESDPAIILLACLTSYQLGKGHVCIDLKNID
TNALFDLNLIRSQLLLAKVSSRSNTWPTLLANSVVVGESAPLQFVTDANKLYLQRYWAYE
LQVAQQLKDLAKQSQQPDLSASLNRLFKRDYGFLFPILAKEREADFSAQSFVAKYLDVVK
KGRISWQDVEQVLLTAKNAQELHALDSLIPEAYCLNWQKLSVAVAATRHFSVISGGPGTG
KTTTVTKLLALLIEQGLLAQQALTIKLVAPTGKAAARLTESIAGAKGKLDLQVSVADLIP
EQAGTIHRLLGVIPNRQAFRHNKDNPLHLDVLVVDEASMVDLPLMAKLLAALPSHARLIL
LGDKDQLASVEAGSVLADICAYAELGYSGGQANWLSKITDYELTQYQASDATAIYDSLCL
LRKSYRFDAESGIGCLAGAVNRGDLNEFDRVWENQHDDIHLHPLSTEAYDALITMAQQGY
QDYLAKVVVSPSEDEAKSILRSFNDFQILTAIREGDFGVHGLNQRIEKALQSARKIRKNQ
SEWYAGRPIMIINNDHGLGLYNGDIGICMQDEDDRMRVYFEMADGNVQSFLPSRLPPHQT
VFAMTIHKSQGSEFRHTVMILPNRFNPVLTRELVYTGITRAKEKLDIFTNVTVMKKAIKL
RTERVSGLMTLLNKD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtacttcagtgtctcaaagaattagccaacgaaaataaaattcgtcaattggat
taccagtttgcccgttttatcagtaattatgaatccgatcccgctattattttattagcc
tgcttaaccagttatcaactgggtaaagggcatgtctgtattgatttaaaaaatatagac
actaatgcgttatttgatttgaatttaattcgctcacaactcttactggcaaaagtttct
agccgtagcaatacttggccgacattattggcaaattcggttgtcgtgggtgagtctgcg
ccactgcagtttgtcacggatgccaataaattatatttacagcgctattgggcttatgag
ttgcaagtcgcgcaacaattaaaagatttagcaaaacaaagtcagcaaccagatttaagt
gctagcctcaatcgtttgttcaaacgtgattatggtttcctatttcctatactcgccaaa
gaacgagaagctgactttagtgcgcaatcatttgtggcgaaatatctcgatgtggtgaag
aaaggtcgaattagttggcaggatgttgagcaggtactactcacagctaaaaatgcccaa
gagttacatgcattagatagcttgatacctgaagcatactgcttaaattggcaaaagtta
tcggtggctgttgctgctactcgtcatttttccgttatttcaggaggacccggtacaggt
aaaacaaccacagtaactaagttattagccttattaattgagcagggcctattagcgcaa
caagcgttaaccattaaactggttgcgcctactggtaaagcggctgcacgtttgacggag
tcaattgcgggcgctaaaggaaagttagatctgcaagttagtgtggcggacttaatccct
gaacaagcgggtacaatacatcgattattaggtgtgatcccgaatagacaagcattccgt
cataacaaagacaatcctttacatctcgatgtcttggttgtcgatgaagcatccatggtt
gatttaccgttaatggcaaaattgttagctgcattaccttcgcatgcgcgattgatatta
ctcggtgataaagatcagctagcctcagtagaagcaggctcagtactcgctgatatctgt
gcgtatgccgagttgggttattcaggtggacaagcgaattggttatcgaagatcactgac
tatgagttgactcagtatcaagcctctgatgcgaccgctatttatgacagcttatgttta
ttacgtaagagttatcgttttgatgctgaatctggtattggctgtttagcgggcgcggta
aataggggggatctaaatgagtttgatcgtgtttgggaaaatcagcacgatgatattcac
ttgcacccgttatcaaccgaagcttacgatgcgttaatcacgatggcgcagcaaggttac
caagactatttagccaaagttgtcgtatcaccgagtgaagacgaagcaaagtcgatatta
cgcagttttaatgattttcaaattttaacggcaatcagagaaggtgactttggtgtacac
ggtttaaatcaacgtatcgaaaaagcgttacagtcagcgcgtaaaatccgtaaaaatcag
tccgaatggtatgcgggtagaccgattatgatcatcaataacgatcatggcctcggttta
tacaatggtgatattggcatttgtatgcaagatgaagatgatcgtatgcgggtttatttt
gaaatggctgatggtaatgtgcaatcttttctacccagtcgattaccgccacaccaaaca
gtctttgccatgacgatccataaatcacagggctctgaatttagacatacggtgatgatt
ttaccaaatcgttttaatccggtgctgaccagagagctggtttataccggtattacccgt
gcaaaagagaaattagacatatttaccaatgttaccgtgatgaaaaaagcgattaaatta
cgaacggaacgggtgagtggattaatgacattactcaataaagattga
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