KEGG   Moritella viscosa: MVIS_0502
Entry
MVIS_0502         CDS       T03770                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase srmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
mvs  Moritella viscosa
Brite
KEGG Orthology (KO) [BR:mvs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mvs03009]
    MVIS_0502 (srmB)
Enzymes [BR:mvs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MVIS_0502 (srmB)
Ribosome biogenesis [BR:mvs03009]
 Prokaryotic type
  rRNA helicases
   MVIS_0502 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Helicase_C_2 DEDD_Tnp_IS110 AAA_22 Utp25_C PhoH ERCC3_RAD25_C DUF2529
Other DBs
NCBI-ProteinID: CED58532
UniProt: A0A090ID38
LinkDB
Position
1:complement(595949..597214)
AA seq 421 aa
MDFESLDLDPELIAALTDNNLVKPTLIQQQVLPTAMEGRDILASAPTGTGKTLAFLLPAV
QHLLDFPRRELGPGRVLILTPTRELASQVFQQAKMLAAYTDHKVSMVTGGVDYALHAEVL
KNSLDIVIATPGRLLEYIRRDAFECAAVEVLILDEADRMLDMGFYDDVKKITDEMTRRQQ
TMLFSATLEGRGIERFAEELLKEPAEFTANPSRKEKAKIHQLMHHVDNHAHKQALLVHWL
RDESTTRSIVFVKTRERLAELVSYLQSQGIPCAYLRGEMDQAKRTRSLNQFKNDKVKVLI
ATDVAARGIDVQDVSHVFNFDLPRSAEVYVHRIGRTARAGKKGTAISLVEAHDLRIFGKI
ERYTEETIKRRVIQGLKPNNKIAMSKTKKKAKVAATGKNKVSAKAKLKAKKRTKKNKSKS
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacttcgaaagtctcgatctagaccctgaattaattgcagcacttactgataataat
cttgttaaaccaacattgattcaacagcaagtattgccaactgccatggaaggtagagat
atccttgcatctgcaccgacaggtacaggtaaaacgctggcatttttattaccagctgtt
cagcatcttcttgactttccacgtcgtgaattaggccctggacgagtacttatcttgaca
ccaacgcgagaactcgcgagtcaagtattccaacaagctaaaatgctagcggcctatact
gaccataaagtatctatggtaacgggtggtgttgattatgcgctacacgctgaagtatta
aaaaatagtcttgatattgtcatcgctacaccgggtcgtttattagaatatatccgtcgt
gacgcatttgaatgcgcagccgttgaagtactgattctagatgaagcagaccgtatgtta
gatatgggtttttatgatgacgtgaaaaaaatcactgatgaaatgactcgtcgtcaacaa
acaatgctattttctgcgaccctagaaggtcgtggtattgagcgttttgctgaagaacta
ttgaaagagccagctgaatttacagcaaatccttcacgtaaagaaaaagcgaaaattcac
caactaatgcatcacgttgataatcatgcacacaagcaagccttgttagtgcattggtta
cgcgacgaaagcacaactcgttctatcgtatttgtaaaaactcgtgaacgtttggctgaa
ttagtaagctatttacagtctcaaggtattccgtgtgcttatttacgtggagagatggat
caagcaaaacgtactcgttcattaaatcaatttaaaaacgataaagtaaaagtactgatt
gcgactgacgtcgccgctcgtggtattgatgttcaagatgtaagccatgtatttaacttt
gatttaccacgtagtgctgaagtttatgttcaccgtattggccgtacagcacgtgccggt
aagaaaggtactgcaatttcattagttgaggcgcatgatctacgtatcttcggtaaaatt
gaacgttatactgaagaaacgattaaacgtcgtgtaattcaaggtttgaaaccaaacaat
aaaattgcaatgtcgaaaactaagaaaaaagcaaaagtagcggcgactggtaaaaataaa
gtatcagcgaaagcaaaacttaaagctaaaaaacgcaccaagaaaaacaagtctaaaagc
aagtaa

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