Moritella viscosa: MVIS_1413
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Entry
MVIS_1413 CDS
T03770
Symbol
sbcC
Name
(GenBank) nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mvs
Moritella viscosa
Brite
KEGG Orthology (KO) [BR:
mvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvs03400
]
MVIS_1413 (sbcC)
DNA repair and recombination proteins [BR:
mvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MVIS_1413 (sbcC)
Archaeal homologous recombinant proteins
MVIS_1413 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
nSTAND3
AAA_21
ABC_tran
Dioxygenase_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CED59403
UniProt:
A0A090K6J4
LinkDB
All DBs
Position
1:1613076..1616747
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AA seq
1223 aa
AA seq
DB search
MKIKRLSFKNINSLKGEWQLNFDQEPFLSNGLFAITGPTGAGKTTILDAICLALYHETPR
LAISKSQNEVMTRNTAECAAEVEFEVQGKGYRASWSQRRAKNSTQGNLQEMKVELAEVVS
GQILASQVKLKKQLVAEITGLDFSRFRKSMLLSQGEFAAFLNAPANDRAELLEELTGTEI
YGQISQAVFESHNLAKAELDKLRAKADGVNLLSDEQRTEIVSEQTRVESLVIDLSQQQVS
LQQQKQWREQLEKAQIGVTEAQSRLTNAEQDTASQQPELERLEKSEPAEALRLPFTHLTQ
ANTKLAELEQNQQALQASVASAQMAVADNQLKLQSSQTQLDASKQQNKAQETLINEQIIP
LDNECAQLTKEQLQFKSQRHQQNSELQTTHQNLAALTKTAETAKDTVNACQAYQQQHAQD
AQLSTRLPLWQSQIQQCNQQQANVESLQQQVITNQQSLQQSLTAQQQLANNVAVNAEREQ
SVKEAANKALQQVSNLLAGDDLADLEQAFSQQSRLQGIVDQLPSLQQRYLTESQEFEGNQ
ASIAGLQQQLADINVEITVKRDLFKAKKNELNDVQRLLVQEQKIASLEQLRSQLEPGQAC
QLCGSTAHPLVEEYQHIADSQAVQRKTQLELDLKQIEADGGELKGLLVEANTKLEHFNRR
NATLQPQLTSLIEQWQDYTQQLNANLMITDSTNSQAFIQQQGLQLTQLSQRIQALKTANT
QLQHAQQALTEFDKNSAELQHQIELVNRDVKATEGTEQKLTQEMQQQTLVLTELQHALTN
SVRELGLTLPEWSQLDHWLVQCQQALQTWEQQAQLLQSANEQSVAAESQLTPLREQLAKL
ELAITQTLETLSSLSENLTAKQQQRQQLFGQRSVADARQTMQQQLAAVEQAHQACSTQGH
ALSNQLHAQQGELATLQQGLTQQQQESRDCLAAWQQALATSPFATEAEFNQALLPAEEKQ
RLLVLKSQLTANLTRCQALFEQASERLLTLEQTPLTELDIVTIVTKLDEITAQLNQGLQR
QGELKQRLADDAARSADLASFYQQIKTCEADYDDKAYLHSLIGSKDGSKFRRFAQGLTLD
HLVTLANQQLNRLHSRYQLQRKLASGSEALALQVVDTWLADAVRDTKTLSGGESFLVSLA
LALGLSDLVSHKTSIDSLFLDEGFGTLDAETLDIALDALDNLNASGKMIGVISHVEALKE
RIPVQVKVNKGSGLGLSSFTVVS
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaacgtctttcttttaaaaatattaactcgttaaaaggcgagtggcagctt
aattttgaccaagaaccgtttttaagtaacggtctatttgcgatcaccggtcctacaggt
gccggtaaaaccaccattctcgatgcgatctgtttggccttgtatcatgagacaccacgt
ctagcgatatcgaaatcgcagaatgaggttatgacgcgtaataccgcagagtgtgccgca
gaagttgagtttgaagtacagggtaaaggttaccgtgccagttggagccaacgtcgtgct
aaaaacagtacgcagggtaatttacaagaaatgaaagtagagctggccgaagtggtttca
ggtcagatccttgcaagccaagtgaaattgaaaaagcagctggtggctgagatcaccgga
ctggatttttctcgattccgtaaatctatgctgttgtcgcaaggtgagtttgccgcgttt
ttgaatgcgcccgctaacgatcgcgctgagttattagaagagctgactggtaccgagatt
tacggtcagatctcacaagctgtatttgaaagtcacaaccttgccaaagcggaattagat
aaattacgcgcgaaagcagatggggttaacttacttagtgacgagcaacgcacagagatc
gtcagtgagcaaactagggtagaaagtttagttattgaccttagccaacagcaagtaagt
ttacaacagcaaaaacagtggcgagaacagcttgaaaaagcacaaataggtgtaactgaa
gcgcaaagtcgcttaacgaatgcagaacaagacacagcaagccaacagcccgaattagaa
cgattagaaaagtctgaaccagcggaagcgttacgcttaccttttactcatttaacgcag
gcaaataccaagctagcggaattagaacaaaatcaacaagcattgcaagcgtcagtggct
tctgctcaaatggcggtcgcggataaccagttgaaactgcaatctagccaaacacaactt
gatgccagtaaacagcagaataaagcacaagaaacattaatcaatgagcagatcatacct
ctggataatgagtgtgcacagttgaccaaagagcaactgcaatttaagtcgcaacggcat
caacaaaatagcgaactgcagaccacgcatcagaatctcgccgcattaacgaaaacagcc
gaaacagctaaagatactgtcaacgcatgccaagcgtatcagcaacaacatgcacaagat
gcgcagctaagtacccgattaccgctatggcagagccagatacagcaatgcaatcagcag
caagcgaatgtcgaatcactacagcaacaagtgataactaatcagcaatcattacagcaa
agtctaactgcgcaacagcagttagcgaataacgtggcggttaatgctgaacgtgagcag
tcggtgaaagaggctgctaataaagcgctgcagcaagtctctaatttactcgcgggtgat
gatttagctgatcttgaacaggcctttagtcagcagtcacgcttacagggtattgttgat
cagctacccagtttacaacagcgctatctgacagagtcacaagagtttgagggcaatcaa
gcaagtatagcgggactacagcaacaacttgccgatattaatgtcgagatcaccgtcaaa
cgcgatctgtttaaagccaaaaagaacgagctaaatgatgttcagcgtttattagtacaa
gaacagaaaattgcgagtttagaacaattacgtagtcagttagaaccggggcaagcgtgt
caattatgtggttcgacagcgcatccgctggtggaagagtaccaacatattgccgactca
caggctgtgcagcgtaaaacccaactagagttagatctaaagcaaattgaagctgatggc
ggtgagttaaaaggtctgttggtcgaagcaaataccaagcttgaacattttaatcgccgt
aatgcgacactgcagccacagttaacgtctttaattgaacaatggcaggattatactcaa
caactgaatgctaaccttatgatcacggatagcaccaattcgcaggcatttatccagcag
caaggcctgcaattaacgcagttgtcacaacgtattcaagctttgaaaacagcgaatact
caattacagcatgcccaacaggcattgactgaatttgataagaacagcgcagagctacag
catcagattgaattggtaaatcgtgacgttaaagcaacagaaggcaccgagcagaaacta
acacaagaaatgcagcaacaaacattagtattaaccgagttacaacacgcgttgactaat
agcgtgagagagttagggcttacgttaccggagtggagtcaacttgatcactggttagta
caatgccaacaagcattacaaacgtgggaacagcaagcgcagttgttacagtcagcgaat
gagcagtctgtcgcggcagaaagtcagttaacgccattacgtgaacaactggcgaaactg
gaattagcgataacgcagaccttagaaaccttgtctagcttgtctgagaacctcactgct
aaacagcagcaacgccagcagttatttggtcagcgtagcgtagcagatgcacgacaaacg
atgcagcaacaattagcggctgttgaacaagcacatcaggcatgttctacgcaaggtcat
gcgttatcgaatcagttacatgcacagcaaggtgagttagctacattacaacaaggtttg
acgcaacaacagcaagaatcgagagactgtttagcggcatggcagcaagcgctagcgacg
agtccttttgccactgaagcagagtttaatcaggcgttactacctgcagaggaaaagcag
cgtttattggtgcttaaatcacaattgaccgcgaatttaactcgttgtcaggcgttattt
gagcaagccagtgagcgtttgctcacgctggaacagacaccattaactgaattggatatt
gtcactattgttactaagttagacgagatcacagcacagttaaatcaaggtttgcagcgt
caaggtgagttgaaacaacgccttgccgatgatgccgctcgcagcgcagatttagccagt
ttttatcagcaaatcaaaacctgtgaagcagactacgatgacaaagcttatttacatagc
ttgattggctcgaaagatggcagtaagttccgccgctttgcgcaagggttaacgctggat
catttagttactttagccaaccaacaattaaatcgtttacacagccgttaccagttgcaa
cgtaaattagcgtctggcagtgaagccttggccctacaggttgtggatacttggttagcg
gatgcagtgcgtgataccaaaaccttatctggtggtgaaagtttcttagtgagcttggca
ttagcactgggtttatctgacttggtcagccataagaccagtattgattcgctattcctt
gatgaaggctttggtacgctcgatgctgagacattagatatcgccttggatgcgttggat
aacttgaatgcttcaggcaaaatgattggcgttatcagccatgttgaagctttgaaagaa
cgtattccagtacaagttaaagtgaacaagggcagtggcttagggctgagttcatttact
gtggtgagctag
DBGET
integrated database retrieval system
