Moritella viscosa: MVIS_3304
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Entry
MVIS_3304 CDS
T03770
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase (DEAD/DEAH box helicase)
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mvs
Moritella viscosa
Pathway
mvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MVIS_3304 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvs03019
]
MVIS_3304 (rhlE)
Enzymes [BR:
mvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MVIS_3304 (rhlE)
Messenger RNA biogenesis [BR:
mvs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MVIS_3304 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
P-loop_SecA
AAA_22
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
CED61212
UniProt:
A0A090IJ39
LinkDB
All DBs
Position
1:3757940..3759295
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AA seq
451 aa
AA seq
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MSFTDLGLSAPILKAVAEKGYDTPSAIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPIL
EKLSQGPRPRANQARTLILTPTRELAAQIAENVEVYSKHLRLTSTVVFGGVKINPQMARL
RRGVDILVATPGRLLDLYNQNAIRFHQLEILVLDEADRMLDMGFLRDIRKILAVLPQKRQ
NLLFSATFSDDIRQLAKGLINDPVEISVTPRNAAAKSVEQWMHPVDKKKKHLLLTQLIKN
ENWQQVLVFTKTKHGANKLTKHLEEQGISAAAIHGNKSQSARTKALANFKSGEVRALIAT
DIAARGIDIEQLPQVVNFELPNVAEDYVHRIGRTGRAGAEGTAISLVCHDELKELIAIEQ
LTQKHLDRIVIEGFAPTDSFPTTPGIRPPKAKKPKKPQAPKMDHQDGQRSGENSRGHKPA
SKNRRHTGPRSETSATANKGNRRRPASSANK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaccgacctcggtttatccgcaccaatcctaaaagctgtagcagaaaaaggc
tacgacacaccatcggcaattcaagcgcaagcaataccagctgtactgtcaggtagggat
gtaatggctgcggcacaaacagggacaggtaaaacagctggttttactctacctatttta
gaaaaattaagccaaggcccacgtccacgtgccaatcaagcacgtacattaatcttaacg
ccgacacgtgaactagcagcacagattgcagaaaacgttgaagtttatagcaagcactta
cgtttaacatcaacagttgtatttggtggtgttaaaattaacccacaaatggcgcgttta
cgtcgtggtgttgatatcttagttgcaacacctggccgtttattagatttatataatcaa
aacgctattcgctttcaccaattagaaattttggtattagatgaagccgatcgcatgctt
gatatgggtttcttacgtgatatccgtaaaatccttgcggtgctaccacaaaaacgtcaa
aacttattattctcagcaaccttttctgatgacatccgccaacttgctaaaggcttaatc
aacgatcccgttgagatttcagtgacaccacgtaatgcggcagcgaaatctgttgaacaa
tggatgcacccggttgataaaaagaaaaaacacttactattaacacagctaattaaaaat
gaaaattggcaacaagtgttagtatttacaaaaacgaagcacggcgcgaacaaattaaca
aaacacttagaagaacaaggtatctctgctgctgcgattcacggtaacaagagtcaaagt
gcacgtacaaaagcactcgccaacttcaaatcaggtgaagtaagagctcttatcgctaca
gatattgctgcacgtggaatcgatattgaacaactaccacaagtcgttaactttgaacta
ccaaacgtagcagaagattatgttcaccgtattggtcgtacaggtcgtgctggcgctgaa
ggtactgcgatttcattagtttgccatgacgaactaaaagaacttatcgcaattgaacag
ttaacacagaaacatctggatcgtattgttattgaaggctttgcacctactgattcattt
ccaacaacacctgggattcgcccaccaaaagcgaaaaaaccaaagaaacctcaagcgcca
aaaatggaccaccaagacggtcaacgttctggggaaaattcccgaggccacaaacctgcg
agtaaaaaccgccgtcacactggcccgcgtagtgaaacaagtgcaacagcaaacaaaggc
aaccgccgtcgtccagctagttctgcgaataaataa
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