Moritella viscosa: MVIS_3815
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Entry
MVIS_3815 CDS
T03770
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA (ATP-dependent helicase hepA)
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mvs
Moritella viscosa
Brite
KEGG Orthology (KO) [BR:
mvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvs03021
]
MVIS_3815 (rapA)
Transcription machinery [BR:
mvs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MVIS_3815 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
TAF4
Motif
Other DBs
NCBI-ProteinID:
CED61708
UniProt:
A0A090KCW0
LinkDB
All DBs
Position
1:4357196..4360108
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AA seq
970 aa
AA seq
DB search
MPFQLGQRWISDTESELGLGTIVAIEGRMLTLLFPASGENRLYARNEAPITRVMFNVGDQ
VLSHEDWSLTVTEVTESSGIITYIGIHQDSGEEVSLRETFLNNFIKFNKPQDRLFAGQID
RMDRFVLRHQTLQHQFSQQQSALNGIQGPRVSLIPHQLHIATEVGQRHAPRVLLADEVGL
GKTIEAGLIIHQQLTAGLANRVLILVPETLQHQWLVEMMRRFNLHFSIFDEERCIESLAE
ADNPFETEQLILCSLDFLRKKRRRFEQAVGADWDLLVVDEAHHLKWSETEPSREYQVVES
LAQKSPGVLLLTATPDQLGHESHFARLRLLDPNRFYDYAAFVTEENNYSIIAKAAQELLD
SPIVSPDTSASLTKLLSEADISDKLTLIQASPDSNEAQQAKQSIINQLLDRHGTGRLLFR
NTRSAIKGFPIRHYQPIPLALPDQYKTSLKVAQMMNGSASYAEAARRGLYPEEIFLEFEG
KDASWCSFDPRVEWLQNFLLANKNEKVLVIAANAETAMSIEESLRVSEGIRGTVFHEGMS
IIERDKAGAYFAQEEAGAQVLLCSEIGSEGRNFQFAQHLVLFDLPLNPDLLEQRIGRLDR
IGQKNDISIHVPFFTNTAQDVLQNWYQNGLNAFEHTCPIGGDIFAEVKDELLTQLAAKEI
DVAATNALITDTRNQYDVLKAKMESGRDRLLELNSNGLGKSDDIIAQLKANDDSPTLPIF
AIRLFDVIGINQEDRGENMLVLKPTDQMLVPSLPHLSEDGITVTFDRETALSRDDVHFLT
WEHPLIRACIELIMTSDTGSTAVSLLKNPALPAGTILLELLYVVETSAPPYCQINRFLPA
TPIRLLLDKNSNNLAVKVDFDSFNRQLNAINRHVATKLVSASQTIIHDLIGKSTSVAEAQ
KQAITSAALDVMQKNMTIELERLQALQKINPNVRDEELAFIEKQTAELTTHINNAQLKLD
AVRFIVVTPS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccaacttggtcagcgctggatcagcgatacggaatcagaattaggattagga
acaatagttgccatagaaggcagaatgttaacgctattatttcctgcaagtggtgagaac
cgtttatatgctcgtaacgaagcgccgatcactcgagtcatgtttaatgtcggtgatcag
gtactctctcatgaagactggagcttaactgttactgaagtaactgaaagctcaggtatc
attacttatataggtattcatcaagactctggtgaagaagtttccttacgtgaaacattc
ctaaacaacttcattaaatttaataaaccacaagatcgcctatttgcaggccaaatcgac
cgtatggatcgatttgtattacgccatcaaacattacagcaccagttttctcaacaacaa
tctgcattaaatgggattcaagggccacgtgtcagtctgataccacatcaattacatatt
gcaaccgaagtgggccaacgtcatgctcctcgtgttttacttgccgatgaagtgggttta
ggtaaaaccattgaagcgggtttgatcatccaccaacaactaaccgcaggacttgccaat
cgtgtgttaattctggtaccagaaacattacaacaccaatggttagtggaaatgatgcgt
cgtttcaatctacactttagtatttttgatgaagagcgttgcatcgaatcgctcgctgaa
gcagataatccattcgaaactgaacaactaatcttatgtagtctggacttcttacgtaaa
aaacgtcgtcgttttgaacaagcagtgggcgccgattgggatttgttggttgttgatgaa
gcgcatcaccttaaatggagtgaaacagaaccaagtcgtgaataccaagttgtagaatca
ttagcgcaaaagtcgcctggcgtactattactaacagcaacaccggatcaacttggtcat
gaaagtcactttgcacgtttacgcttattagatccaaaccgtttctatgattatgccgca
ttcgttactgaagaaaataattattctattattgcaaaagcagcacaagaactattagat
tcaccaatcgtatccccggacacctcagcatcattaactaaactattaagtgaagctgat
atatcagacaagttgactttaattcaagcatcgccagattcaaatgaagcacagcaggct
aaacaatcaataatcaatcaattattggatcgccatggcacaggtcgtttattattccgt
aatacacgctctgcaatcaaaggtttcccgattcgtcactatcagccaattcctttagca
ctaccagaccaatataaaacgtcattaaaagtcgcacaaatgatgaatggctcagcaagt
tatgcggaagctgcgcgtcgtggtctatacccagaagaaatcttcttagaattcgaagga
aaagacgcatcttggtgtagttttgacccacgtgttgaatggttacaaaacttcttactt
gccaataaaaatgaaaaagtattagtcattgcagcaaatgccgaaacagcaatgtcaatc
gaagagtcgctacgcgtgagtgaaggtattcgtggaacagtattccatgaaggtatgtct
attatcgagcgtgataaagcgggcgcttacttcgctcaagaagaagctggggcacaagtt
ttactttgttctgaaattggttctgaaggtcgtaacttccaatttgcacaacaccttgta
ttatttgatttaccattaaacccagatttacttgagcaacgaattggtcgtttagatcgc
atcggtcagaaaaatgacatcagtattcacgtacctttctttacgaataccgcacaggat
gtattacaaaactggtatcagaatggcctaaatgcatttgagcatacttgccctatcggt
ggcgatatttttgcagaagtaaaagatgaattactgactcaactagccgcaaaagaaatt
gatgtggctgcaacaaatgcattgatcactgatacacgcaatcaatacgatgtattaaaa
gcaaaaatggaaagtggccgagatcgtttactggaactaaattctaacggtttaggtaaa
tcagacgatattatcgcgcaattaaaagccaatgatgatagccctacgctacctattttt
gcgatacgcttattcgatgttattggtataaaccaagaagatcgtggcgagaatatgttg
gtattaaaaccgacagatcagatgttagtaccaagtttgccacatctatctgaagacggc
attacagttaccttcgatcgtgagaccgcattatcgcgtgacgacgtacatttccttact
tgggaacacccattaatacgcgcatgtattgaattaatcatgacgtctgatacaggttct
acagctgtttcactgttaaaaaatccagcgctacctgctggcactattttattagaacta
ctttatgtggttgaaacatcagcaccaccttattgtcaaattaatcgtttcttgccagca
acaccaattcgtttgttactggataaaaacagtaataatttagccgtaaaagtagacttt
gatagtttcaatcgtcaacttaatgcgattaaccgccatgtagcaacgaaactggtttcg
gcatctcaaacgattatccatgatcttattggtaaatcgacgagtgttgcagaagcacaa
aagcaagctattaccagcgctgcgcttgatgttatgcaaaaaaatatgacgatagaatta
gaacgtctacaagcactgcaaaagattaaccctaatgtacgtgatgaagaactggcattt
attgaaaaacaaacagcagaactcacaacacacattaataatgctcagcttaaactagat
gcggtacgctttatagtcgttacaccgagctaa
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