Mammaliicoccus vitulinus: I6J10_03635
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Entry
I6J10_03635 CDS
T07207
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mvt
Mammaliicoccus vitulinus
Pathway
mvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J10_03635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvt03019
]
I6J10_03635
Messenger RNA biogenesis [BR:
mvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6J10_03635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QQT16041
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All DBs
Position
752471..754144
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AA seq
557 aa
AA seq
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MSLIKKKNDKIRIIPLGGVGEIAKNMYIVEVDEEMFMLDAGLMFPEDEMLGVDVVIPDIQ
YVIENKEKLKGIFLSHGHEDSIGAVSYILEKLDAPVYGSRLTIALVKDHMKTRKINKKVR
YYTVNKDSVMRFKNVNVTFFNTTHSIPDSLGVCIHTSYGSIVYTGEFKFDQSLQGAYAPD
IAKMTQIGQNGVFALISDSTEAEKPGYNVPENVIESHMVDEFAKANGRIIVSCYASNFIR
IQQVLNAAHKLNRKVSFLGRSLESSFNVARKLGYFNIPENLLVPVHDISKYPKNEMIIIA
TGMQGEPIEALGQMAQQRHPILNILEGDNVYISTTTSANMEVIIGQTLNELVRAGAHIMP
NNKKTHASSHGCMEELKLMLNLMKPEYFIPVQGEFKMQIAHAKLAAETGVDPEKIFLLEK
GDVVNFDGTKMLANEKVTAGNVLIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR
KIVGGPEIQSRGFVYVRESEELLNDASEKVREIVEEGLLQKKIEWSEMKQNMRDKLGKYL
YEQTKRRPMIIPIISEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaataaaaaagaaaaatgataaaattcgtatcataccactcggtggtgttgga
gaaatagcaaaaaatatgtatatcgttgaagtggatgaagaaatgttcatgttagacgct
ggattaatgtttccagaagacgaaatgctaggcgtagacgttgttataccggatatacaa
tatgttattgaaaacaaagagaaacttaaaggaatctttttatcacatggacatgaagat
tcaataggagcagttagctatatacttgaaaagctagatgcaccagtatatggttcaaga
ttaacaattgctttagttaaagatcatatgaaaactagaaaaataaataaaaaagtacgt
tattacacagtaaataaagattcagtaatgagatttaaaaatgttaatgtaacgttcttt
aatacaacacattcaattccagatagtttaggtgtatgtatacatacatcttacggctca
atcgtctatactggtgagtttaaatttgaccaaagtttacaaggtgcatatgcgcccgat
atcgctaaaatgacgcaaatcggtcaaaatggtgtatttgcgcttataagtgattcgaca
gaagcagaaaaaccaggatataatgttccggaaaatgttatcgaaagtcatatggtagat
gaatttgctaaagcgaacggtcgaattatcgtatcttgttatgcatcaaacttcattcgt
atacaacaagtgttaaatgcagcacataaattaaatcgtaaagtatctttcttaggacgt
tcactggaaagttcatttaatgttgcacgtaagttgggatattttaatattccagaaaat
ttattagttcctgtacatgatattagtaaatatcctaagaacgaaatgatcatcattgca
acaggtatgcaaggtgagcctattgaagctcttggacaaatggctcaacaaagacatcca
attttaaatattttagaaggcgataatgtttatatttctacaactacgtctgcaaatatg
gaagtaattattggtcaaactttaaatgagcttgttagagctggcgcacatattatgcct
aataataaaaagacacacgcatcaagtcacggttgtatggaagaacttaaattgatgctt
aatttaatgaaacctgagtactttattcctgtacaaggtgaatttaaaatgcaaattgca
catgcgaaattggctgctgaaacaggcgtagatcctgaaaagattttcttacttgaaaaa
ggtgatgttgttaactttgatggtacaaaaatgcttgctaatgaaaaagtaacagcaggg
aatgttttaatagatggaataggcgttggagatgttggtaatatcgtcttaagagataga
catttattagctgaagatggcatatttatagctgttgttacattagatcctaagaataga
aaaattgttgggggacctgaaattcaatcacgtggatttgtttatgtaagggaaagtgaa
gaactattaaatgatgcttcagaaaaagtacgtgaaattgttgaagaaggtttacttcaa
aagaaaattgaatggtctgaaatgaaacaaaatatgcgtgataaactcggcaaatatcta
tatgaacaaacgaaacgccgcccgatgattattccaattatttctgaaatctaa
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