Mammaliicoccus vitulinus: I6J10_05285
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Entry
I6J10_05285 CDS
T07207
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
mvt
Mammaliicoccus vitulinus
Brite
KEGG Orthology (KO) [BR:
mvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvt03019
]
I6J10_05285
03009 Ribosome biogenesis [BR:
mvt03009
]
I6J10_05285
Enzymes [BR:
mvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6J10_05285
Messenger RNA biogenesis [BR:
mvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6J10_05285
Ribosome biogenesis [BR:
mvt03009
]
Prokaryotic type
rRNA helicases
I6J10_05285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
QQT16359
LinkDB
All DBs
Position
complement(1083170..1084504)
Genome browser
AA seq
444 aa
AA seq
DB search
MSKHPFEHFQLGNELVEAVKDLNFNQPTEVQRRVIPKIIKGSNIIGQSQTGTGKSHAFLL
PLFDKINVDIKEPQIIILAPTRELAKQLYDAASHLAQFKKGVKVSLYIGGTDKSRDIDKS
KNTPQVVVGTPNRIDDMAVERALDLHLAKYVVIDEADLMIDLGFMPKVDSVASRLDGNAQ
ISVFSATIPKALHPFLNKYLSNPEFVEIETATSNKDNIDFYLIPTKGEEKEAKILKVMKV
INPYLAIIFANSRDRADELVAHLSKEGYKVGVIHGGLTPRERTQQMKRVKQLDFEFVVAS
DLASRGIDIEGVSHVINYDLPKEIDFFTHRVGRTGRGDYKGVAISLYTPDEDDLITQIEK
NNYKFNHVDIKNGEFVEIKDRQNRTRRVKKEDNIEQTLKQKLKRNNKNKVKPGYKKKFKR
ELEDMKFKEKKAHSKRTKKQGRKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcatccgtttgaacattttcaattaggaaatgaattagtagaggcggttaaa
gatttaaattttaatcagccaacagaagtacaacgacgtgtaataccgaagattataaaa
gggtccaatataatcggacaatctcagactggtactggtaagtcacatgcatttttatta
ccattattcgataaaataaatgttgatataaaagaaccgcaaatcattattttagcgcct
acgagagagttagctaaacaattatatgatgccgcatcacatttagcacagtttaaaaaa
ggtgttaaagtcagtttatatattggtggtacagataaatcaagagatattgataaatct
aaaaacacaccgcaagtagttgtaggtacaccgaatagaattgatgacatggctgtagaa
agagcattagacttacatttagctaagtatgttgtcattgatgaagcagatttaatgatc
gatttaggattcatgcctaaagttgatagtgttgcgagtagattagatggaaatgcacaa
atctctgtatttagtgcaacgattcctaaagctttacatccgttcttaaataaatattta
agtaatccggaatttgttgaaattgaaacagcaacttctaacaaagataatattgatttc
tacttaatacctactaaaggtgaagagaaagaagcaaaaatcttaaaagttatgaaagtg
attaatccttatttagcaattatattcgctaacagccgtgatagagctgatgagttagta
gctcatttatcaaaagaaggatataaagttggcgttatccatggaggattaacaccgaga
gaaagaacgcaacaaatgaagcgtgttaaacaattagactttgaatttgttgtggcaagt
gatttagcatcacgcggtattgatattgaaggtgttagtcatgtgattaactatgacttg
cctaaagaaattgatttctttacgcatagagttggtagaacaggtcgtggagattataaa
ggcgtagcgattagtttatatacaccagacgaagatgatctgatcacacaaattgagaaa
aacaattacaaatttaatcatgttgatattaaaaatggtgaattcgtagaaattaaagat
cgtcaaaatagaacaagacgtgttaaaaaagaagacaacatcgagcagacacttaagcaa
aaacttaaacgaaacaataaaaataaagttaaacctggttacaagaagaaatttaaacgc
gaattagaagacatgaaatttaaagaaaagaaagcacattctaagaggactaaaaaacaa
ggcagaaaaggatag
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