Mammaliicoccus vitulinus: I6J10_05310
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Entry
I6J10_05310 CDS
T07207
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mvt
Mammaliicoccus vitulinus
Pathway
mvt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mvt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6J10_05310 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvt03021
]
I6J10_05310 (rpoD)
Transcription machinery [BR:
mvt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J10_05310 (rpoD)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QQT16364
LinkDB
All DBs
Position
complement(1087946..1089055)
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AA seq
369 aa
AA seq
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MSDKELNKINSANNEAVLTVDQVKHQLIEQGKKAGHLSHEEIADKLQNFEMDPDQMDDFF
DLINENEINLINEKDSTDTNDKLNLNDLSAPPGVKINDPVRMYLKEIGRVNLLTAQEEIE
LAKRIEKGDDVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPSPEEI
GEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDAQSPSDHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKRLKDFMD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaagaattaaacaaaatcaatagcgctaataatgaagcagtacttactgta
gatcaagttaagcatcaattaattgaacaaggtaaaaaagcaggacatttgagtcacgaa
gaaattgcagataaactgcaaaactttgaaatggatccagatcaaatggatgatttcttt
gatttaatcaatgagaatgaaatcaatttgattaatgaaaaagactctacagatactaat
gacaaattaaatttaaatgacttaagtgctcctccaggtgtaaaaataaatgacccagtt
agaatgtacttaaaagaaattggacgcgttaatttattaacagctcaagaagaaatagaa
ttggctaaacgtatcgaaaaaggtgacgatgttgctaaatcacgccttgctgaagctaac
ttaagacttgtagtcagtattgcgaaacgttatgtaggtagaggtatgttgttcttagac
cttattcaagaaggtaatatgggtcttattaaagcagtagaaaaattcgactttaataaa
ggtttcaaattctcaacttatgcgacttggtggattcgccaagcaataacaagagctatc
gctgaccaagcacgtacaatccgtattccagttcatatggttgaaactattaataaatta
atccgtgttcaacgtcaattactacaggatttaggaagagacccatctcctgaagaaatc
ggtgaagaaatggatttaacaccagaaaaagtgcgtgaaattttaaaaatagcacaagag
cccgtttcattagaaacaccaattggtgaagaagatgacagtcatctaggcgacttcatt
gaggaccaagatgctcaaagcccatcagatcatgctgcatatgaattgttaaaagaacaa
ttagaagatgttttagatacattaacagatagagaagaaaatgtattaagacttagattt
ggtcttgatgatggcagaacaagaacgctagaagaagttggtaaagtattcggcgtgacg
agagaacgtattcgtcaaatcgaagcaaaagcattacgcaagttaagacatccgtctaga
agtaagcgtttgaaagattttatggactaa
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