Mammaliicoccus vitulinus: I6J10_07185
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Entry
I6J10_07185 CDS
T07207
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mvt
Mammaliicoccus vitulinus
Brite
KEGG Orthology (KO) [BR:
mvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvt03009
]
I6J10_07185 (rlmD)
Enzymes [BR:
mvt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I6J10_07185 (rlmD)
Ribosome biogenesis [BR:
mvt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I6J10_07185 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Cons_hypoth95
PrmA
Methyltransf_25
MTS
TRAM
TRM5-TYW2_MTfase
N6_N4_Mtase
Methyltransf_32
Methyltransf_11
TPMT
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QQT14382
LinkDB
All DBs
Position
complement(1440127..1441500)
Genome browser
AA seq
457 aa
AA seq
DB search
MAGIVNKNEIYTGQVIDFTHEGHGVVKFDRYPIFVPNAIKDETIKFKVIKVKKQFAIGKL
ITIKEASENRVEAPCEYYNVCGGCQLQHLGYSAQLEMKKEQVVNLFKRKSNFEDTIIHDT
IGMENPWQYRNKSQIPVGRNREGEIELGFYRQRSHDIVNIDHCMIQDEKHDQIMIKLKAL
LEQINISVYNEQKHKGELRHIILRSGYYTGETMIIFVTNSKQLSHKNKIIEYITAEFDNV
VSIKHNINLEKSNVIMGNTSHTLFGEDTITDKLSEYQFKISDTSFYQINPVQTEKLYRKA
LEYAQLDGEETVIDAYCGIGTIGSYMSQQAKHVYGVEVVEQAIENAKENAEINHIDNATW
EAGKAEEVILKWQKEGIKPEVVMVDPPRKGCDQTFIETLIELSPKRIVYISCNPATQVRD
VEILKRSGYQLKEITPVDMFPHTTHVETVALIEKIIE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtatagtaaataagaatgaaatatatacaggacaagttattgattttacacat
gaaggtcacggtgtcgtaaagtttgatcgttatccgatttttgtaccaaacgcaataaaa
gatgaaacgattaaatttaaagtcattaaagtaaaaaagcaatttgctatcggtaaattg
ataacgattaaagaagcatctgaaaatagagtagaagcaccatgtgaatattataatgtg
tgtggaggatgtcagcttcaacatttaggttattcagcacaattagaaatgaaaaaagaa
caagttgtaaacttgttcaagcgtaagtcaaacttcgaagatacgatcattcatgacact
atcggtatggaaaatccatggcaatatcgaaataaatctcaaataccagtgggtagaaat
agagaaggtgaaatcgagcttggattctatagacagagaagtcatgatatcgtgaatatt
gatcattgtatgatacaagatgaaaagcacgatcaaattatgattaaactgaaagcattg
ttagaacaaattaatataagtgtttataacgagcaaaagcataaaggggaattaaggcac
atcatattgagaagcgggtattatactggcgaaacaatgattatctttgttacgaatagt
aaacaattaagccataagaacaagattatagaatatattacagcagaatttgataacgtg
gtcagcattaaacataatataaatttagaaaaatcaaacgttattatgggtaacacatct
catacattgtttggagaagatacgattacagataaattatcagaatatcaatttaaaata
tccgatacatctttctatcaaattaatccagtgcaaacagaaaaattatatcgtaaagca
ttagaatatgctcaattagatggagaagaaacggttatagatgcatattgtggtatagga
acgataggctcatacatgtcacaacaagcaaaacacgtatatggcgttgaagtcgtagaa
caagctatagaaaatgcgaaagaaaacgcagaaatcaatcatattgataatgcaacatgg
gaagcaggaaaagcagaagaagtcatattaaaatggcaaaaagaaggcataaagccagaa
gttgttatggtcgatccacctagaaaaggctgtgaccaaacatttatagaaactttaata
gaactgtcaccaaagagaattgtctatatatcatgtaatccagcaacacaagtaagagat
gtagaaatattaaaaagaagcggttatcaattaaaagaaattacaccagttgacatgttc
ccacatacaacacatgttgaaacagtcgctttaatagaaaaaataattgaataa
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