Mammaliicoccus vitulinus: I6J10_07765
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Entry
I6J10_07765 CDS
T07207
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mvt
Mammaliicoccus vitulinus
Pathway
mvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J10_07765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvt03019
]
I6J10_07765
03009 Ribosome biogenesis [BR:
mvt03009
]
I6J10_07765
Enzymes [BR:
mvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6J10_07765
Messenger RNA biogenesis [BR:
mvt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6J10_07765
Ribosome biogenesis [BR:
mvt03009
]
Prokaryotic type
rRNA helicases
I6J10_07765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
NAT10_TcmA_helicase
CMS1
Flavi_DEAD
Acetyltransf_15
AAA_19
Cas3-like_C_2
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
QQT14488
LinkDB
All DBs
Position
complement(1556587..1558119)
Genome browser
AA seq
510 aa
AA seq
DB search
MQKFKELGISEATLNALDGMGFTEPTPIQIESIPHTVKGTDVLGQAQTGTGKTGAFGIPL
IDKVANKQGVQALILAPTRELANQVAEQLRSFSKGQSVTVVTVFGGMPIDRQIKSLKKGP
QIVVGTPGRVIDHLNRKTLKTESITTLILDEADEMMNMGFIDDMRFIMSKLPSENRQTLL
FSATMPKAIQDLVQKFMKKPQIVKTMSNELSNPQIDEYYTIVKELEKFETFTNLLDVQNP
ELAIVFGRTKRRVDELSSALISKGYRAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISDVSHVYNFDIPQDTESYTHRIGRTGRAGKKGAAVTFVNPVEMDYIRQIEKAFK
REMTSLRPPTPGEVMKAKESDVKAKVKGWVESPIEGRVEKIAEELISEYGDQKLVAALLQ
ELITSSNDADVQLTFEKPLSKKSGQRGKQGNRGGGNSRGKSRTRFEGKNSNRRSNDKNSN
FDRNKGKNTNSSKPRSKKQFSGRTFAEHSK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttaaagaattaggtatttccgaagctaccttaaacgctttggacggaatg
ggctttactgaaccgacaccaatacaaatcgaaagtattcctcacacagtaaaaggaacg
gacgtgctaggacaagcacaaactggaacaggaaaaactggtgcatttggtatcccatta
atagataaagtagcaaataaacaaggtgttcaagcattaatccttgcaccaacacgtgaa
ttagctaaccaagtagcagagcaattacgtagttttagtaaaggacaaagtgtaactgtt
gtaactgtatttggtggtatgccaatagacagacaaattaaatcacttaaaaaaggtcca
caaattgtggtaggtacacctggccgtgttattgaccatttaaatagaaagacgttaaaa
acggaatctattacaacgttaatattagatgaagcagatgaaatgatgaacatgggcttt
atagatgatatgagatttataatgtctaaacttccttctgaaaatcgtcaaacattacta
ttctcagcgactatgcctaaagctatccaagatttagtgcaaaaattcatgaagaaacca
caaatcgttaaaacaatgtctaacgaattatcaaatcctcaaatcgatgagtattataca
atcgttaaagaattagaaaaatttgagacattcactaatttactagacgtgcaaaaccca
gaattagcgattgtgtttggtcgtacgaaacgtcgtgttgatgaattatcaagtgcttta
atttctaaaggctatcgcgctgaaggattacacggagatattacacaagctaaacgttta
gaagtattgaagaaattcaaaaatgatcaaatcgacattttagttgctactgatgtagct
gcacgtggtttggatatttcagacgtaagtcacgtttataactttgatataccacaagat
actgaaagctatactcaccgtatcggccgtacaggtagagctggtaaaaaaggtgctgcg
gtaacatttgttaacccagttgaaatggattatatccgtcaaatcgaaaaagctttcaaa
cgtgaaatgacgtcattacgtccaccaacacctggtgaagtaatgaaagctaaagaatca
gatgttaaagctaaagttaaaggttgggtagaaagcccaatcgaaggtcgagttgaaaaa
atagctgaagagttaatcagcgaatatggtgaccaaaaattagttgctgctttattacaa
gagttaatcacttcaagtaacgatgcagatgttcaattaacatttgaaaaaccattatct
aaaaaatctggtcaaagaggtaagcaaggtaaccgcggtggaggaaactctcgtggtaaa
tctagaactagattcgaaggtaaaaacagcaaccgtcgtagtaacgacaaaaatagtaat
tttgaccgcaataaaggtaaaaatactaattcaagtaaaccacgttcaaaaaaacaattc
tcaggtagaacattcgctgagcattcaaaataa
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