Methanocaldococcus vulcanius: Metvu_0035
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Entry
Metvu_0035 CDS
T01105
Name
(GenBank) Transcription factor TFIIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mvu
Methanocaldococcus vulcanius
Pathway
mvu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mvu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Metvu_0035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvu03021
]
Metvu_0035
Transcription machinery [BR:
mvu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Metvu_0035
Prokaryotic type
Archaeal type
TFE
Metvu_0035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
HTH_9
Sigma70_r3
HypA
HTH_24
HTH_IclR
HTH_20
TrmB
TnsD
Rad50_zn_hook
Zn_ribbon_TFIIB
HTH_5
Rrf2
Dimerisation
Sigma70_r4_2
HTH_40
HTH_Cmi2_C
DUF7129
HTH_65
zf-met
Prefoldin_2
Zn_ribbon_4
Motif
Other DBs
NCBI-ProteinID:
ACX71907
UniProt:
C9REA5
LinkDB
All DBs
Position
complement(35183..35737)
Genome browser
AA seq
184 aa
AA seq
DB search
MGEKNVEMIYEMLNDPLVQEVLFNIFEGDEKGFEVIEVLLEKGETTEEEIAKELGLKLNV
VRKLLYKLYDARLVDYKRWKDEETNWYSYTWLPTLEKLPYVVKKKIKELVKDLEEKLEFE
KNNMFFFCPRCNVRFTFEEAMDYGFACPGCGGMLKEFDNSELIKDLEEQLKFLKEELKNN
PFLK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaagaacgtagagatgatatatgagatgttgaacgatccgttggttcaagaa
gtcctttttaatatatttgagggagatgaaaagggctttgaagttatagaagtgctttta
gagaaaggagaaacgacagaggaagaaattgccaaagaattgggattgaagcttaatgta
gtcagaaaattattgtataagttatatgatgcaagattagttgattataagagatggaaa
gatgaggaaacaaattggtattcctatacttggctaccaactcttgaaaaacttccatat
gttgtaaaaaagaagataaaagaacttgttaaagatcttgaggaaaagttggaatttgaa
aaaaataatatgtttttcttctgtccaagatgtaatgtaaggtttacgtttgaagaggcg
atggattatgggttcgcatgtcctggttgtggaggtatgttaaaagagtttgacaactct
gaactaattaaggatctggaagagcagttgaaatttttaaaagaagaattaaaaaacaat
ccctttttaaaataa
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