Methanocaldococcus vulcanius: Metvu_0418
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Entry
Metvu_0418 CDS
T01105
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mvu
Methanocaldococcus vulcanius
Brite
KEGG Orthology (KO) [BR:
mvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvu03019
]
Metvu_0418
Messenger RNA biogenesis [BR:
mvu03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
Metvu_0418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
Helicase_C_2
MTHFR
Helicase_dom4_arc
Prefoldin_3
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ACX72278
UniProt:
C9RFC6
LinkDB
All DBs
Position
complement(395438..397888)
Genome browser
AA seq
816 aa
AA seq
DB search
MIDVLILRKPKKKKDEIEIVKISDEIEEGIPIKSNQKIYANYKKIGDKYKLYRCRIGDKL
IQPSKVLDLLRSEDLFLLKDSKDIEDVLKSNNLKFKYIELCPFCLLKSVYKRLTKNNKCR
YGNLTICLECGIEEIKQEVKIDDEFIKKFLKRFKDVDKVLSLLRIKNPLDNPELTRYDII
MGSEEDNIENYKVDDLNIPEELKNIIKSRGIKELLPVQTLSVKAGLLENRDLLVVSATSS
GKTLIGELAGIKNLIEGKGKFIFLVPLVALANQKYAEFKERYEKLGFKVSLRVGLGRIGK
KPDINTSIDADIIVGTYEGIDYLIRTGKLKDVGTVVIDEIHSLNLEERGARLDGLIGRLR
FLHKNAQKIYLSATIGNPKFLAKELNSRLVLYSGRPVPLERHIIFCKNEFSKINIIKDIV
RREWQNISKFGYRGQCLIFTYSRKRAERLARALRSKGIKAEFYHGGMEYLKRRKVEEDFA
KQKIQCVVTTAALSAGVDFPASTVILESLAMGADWLNPAEFQQMCGRAGRKGMHEIGKVY
LLVEIGRKYHAKMENTEDEIAFKLLNAVPEDVLVEFSEDEEEEQILATVSSGIDNIKDID
KVPYLGRTFSLQTILKNLEKYGMIYKRECNKVKLTSYGKAVAISFLYPKIAEKIKKGIIE
NKNIIKLIAEIMPFENVYLSNNLKTKLSKILNINIPSRFFDALEIIKESMEKIKDKKLKE
DLTVIIMEFEGVEVEEKILEMIINLRTAGRTPGQISKILHEDLNIQTYSGDIYYYLEQLL
NLLDAIERISSIFNKKYAEKVKTLKEKIENPNFKGR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgtgctaatacttagaaaaccaaaaaagaaaaaggatgaaatcgaaattgtt
aaaatcagtgatgagattgaggaaggaattcctataaaaagtaatcaaaagatatatgca
aactacaagaaaataggagataaatacaaattatatcgatgtaggataggagataaactc
atacaaccatcaaaggtattagatcttctaagatctgaggatctgttcttattaaaggat
agtaaagatatagaagatgttttaaaatctaataaccttaaattcaaatatattgagcta
tgtcctttctgtttattgaaaagcgtatacaaaaggttaacaaaaaataacaaatgccgt
tatggaaatctaacgatctgcttagagtgcggtattgaagaaataaaacaggaagtaaaa
atcgatgatgagtttataaaaaaatttttaaaaagatttaaagatgttgataaagtcctt
tcgctgttaaggattaaaaacccacttgataatccggaattaacaagatacgatataatt
atgggaagtgaagaagataacattgaaaactacaaagtcgatgatctcaacatccctgaa
gagttaaaaaatataataaaaagcagaggaattaaggaacttctaccggttcaaacacta
tctgttaaagcaggtctcctcgaaaacagagatctacttgtcgtttctgcaacatcctca
gggaaaacccttataggagagttggcagggatcaaaaatctaattgagggtaaaggaaaa
tttattttcttagttccattagtcgcattagcaaatcaaaagtatgccgaatttaaagaa
agatatgaaaaattaggttttaaagttagtttaagagttggattaggaagaataggaaaa
aaaccagatataaacacttcaatagatgcagatattatagttggaacctatgaggggata
gattacctaataaggactggaaagttgaaggatgttgggactgttgttattgatgagatc
cactctctaaacttggaagaaagaggagcaagattagacggattaattggaagattgcga
tttttacataaaaatgctcaaaagatctatctatcggcaactatcggaaatccgaaattt
ttagctaaggagttgaattcaaggttagttctatatagtggaagaccagttccgttagaa
aggcatattatcttctgtaaaaacgaattttctaaaataaacattataaaagacattgtt
agaagagaatggcagaacatttcgaaatttgggtatcgaggacagtgcttaatctttaca
tattcaagaaaaagagctgaaagattggcaagagcattaagatcgaaaggaattaaagct
gagttctatcatggaggaatggaatatttaaaaagaagaaaagttgaggaggactttgca
aagcagaaaatccagtgcgtagttacaaccgctgcactttcagcaggtgttgattttcct
gcttcaaccgttatcttggagagtttagcgatgggtgcagattggctaaatcctgcagag
tttcaacagatgtgtggtagggcaggaagaaaaggcatgcatgagattggaaaggtttac
ctcttggttgaaatagggagaaaatatcatgctaaaatggaaaacacggaagatgagatt
gcatttaaactcttgaatgcagttcctgaggatgttttagtggaattcagcgaagatgaa
gaagaagaacaaatattagcaacagtatcatctggaattgataatattaaagatattgat
aaagtgccctatcttggaagaacgttttcacttcaaactatattaaaaaacttggagaag
tatggaatgatctataaaagagagtgtaataaagtaaaactaacaagttatggaaaagca
gtggcgatttcatttctatatcctaagatagcagaaaagattaaaaaaggaataatagaa
aataaaaatattataaagttaatagcagagatcatgccctttgaaaacgtttatctatca
aacaatttgaaaacgaaactatcaaaaatactaaatataaacattccctcaagatttttt
gatgcattagagattataaaagagagtatggaaaaaataaaggacaaaaaattgaaagag
gatctaacagttataattatggagtttgaaggagtagaagtcgaagaaaaaatattagag
atgataataaatctaagaactgcgggaagaacaccaggacagatttcgaaaatactccat
gaagatctcaatatacagacatattcaggagatatttactactatttagagcagttatta
aatttattagatgctatcgaaagaatatcaagcatatttaacaaaaaatatgctgaaaaa
gttaaaactttgaaagaaaagatagaaaatccaaattttaagggacgataa
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