KEGG   Methanocaldococcus vulcanius: Metvu_0646
Entry
Metvu_0646        CDS       T01105                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mvu  Methanocaldococcus vulcanius
Pathway
mvu03030  DNA replication
mvu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metvu_0646
   03410 Base excision repair
    Metvu_0646
   03450 Non-homologous end-joining
    Metvu_0646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mvu03032]
    Metvu_0646
   03400 DNA repair and recombination proteins [BR:mvu03400]
    Metvu_0646
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mvu04147]
    Metvu_0646
DNA replication proteins [BR:mvu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metvu_0646
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metvu_0646
DNA repair and recombination proteins [BR:mvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metvu_0646
Exosome [BR:mvu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Metvu_0646
SSDB
Motif
Pfam: XPG_I XPG_N DUF1002 5_3_exonuc_N SNaCT12 5_3_exonuc
Other DBs
NCBI-ProteinID: ACX72505
UniProt: C9RG03
LinkDB
Position
602463..603443
AA seq 326 aa
MGVQFGDFIPKRQISLDDLKGKKVAIDGMNALYQFLTSIRLKDGSPLKNKKGEITSAYNG
IFYKTIHLLENDITPIWVFDGEPPKLKEKTRKMRRHMKEQAEEKMKEAMKKENLDEVAKF
AKRASYLTPKIVDNCKYLLGLMGIPYVNAPSEGEAQASYMAKKGDVWAVVSQDYDSLLYG
APRVVRNLTTTKEMPELINLDDVLEELRISLDDLIDIAILMGTDYNPGGVKGIGFKRAYE
LVKSGVAKDVLKKEVENYEEIRKIFKEPKITDEYSVNLRLPNKEGIIKFLVDENDFNYER
VKKHVDRLYTLIANKTKQKTLDAWFK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggagtgcaatttggagattttattccaaaaagacaaatatccttagacgatttaaaa
ggaaaaaaagtggctattgatggaatgaatgctctttatcaatttttaacctcaattcga
ttaaaagatggatctccactaaaaaataaaaaaggagaaattacatccgcctacaacgga
atcttctataaaacaatacatttattagaaaatgatataactccaatatgggtttttgat
ggagaaccaccgaaattaaaagaaaaaaccagaaaaatgagaagacatatgaaagaacaa
gcagaagaaaaaatgaaagaagcaatgaaaaaagaaaatttggatgaagtggctaaattt
gcaaagagggcaagttatctaaccccaaaaattgtggataattgcaaatacttacttgga
ttaatgggtattccatacgtaaatgctccatcagaaggagaagcacaagccagttatatg
gcaaaaaaaggagacgtatgggcagtagtaagtcaagattatgattctttgttatatggg
gctccaagagtcgttagaaacttaacaacaactaaggaaatgcccgaattgataaactta
gatgatgtattggaagagttaagaatatccttggatgatcttattgatatagcgatattg
atgggaaccgactacaaccccggaggagttaaaggaataggatttaaaagagcttatgaa
cttgttaaaagcggagttgctaaggatgttttaaaaaaggaggtggaaaactacgaagaa
ataagaaaaatatttaaagaaccaaaaatcactgatgaatactctgtaaatttgagatta
ccaaataaggaagggataattaaatttttagtagatgaaaatgattttaactatgaaagg
gtaaaaaagcacgttgatagattatatactttaatcgcaaataaaacaaagcaaaaaaca
ttagatgcatggtttaaataa

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