Methanocaldococcus vulcanius: Metvu_0887
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Entry
Metvu_0887 CDS
T01105
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mvu
Methanocaldococcus vulcanius
Brite
KEGG Orthology (KO) [BR:
mvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvu03400
]
Metvu_0887
DNA repair and recombination proteins [BR:
mvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Metvu_0887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACX72745
UniProt:
C9RGP3
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Position
868036..869568
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AA seq
510 aa
AA seq
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MVNCMDKVIGYTIGETRIDELTFLAREAPKVGDYVKIKYDGSELLGMVESTIQGNLALED
ILNIDHLEKIRKFEDNSSYYILGKIKVLGDVKDLNEEKALKLPRVPPKPGIPIYLAENDL
LKEVFGKGHLKIGHLVTRNDVDVKLDANKLCSRHLAILAMTGMGKSNTVAVLLRELNKLK
ATVLVFDMHGEYRDIYCESEDLRKHIIEPKINIYKIGDEDLCDLAGVDAQATKQRPYIRK
AIKEIKENHRESDFSTVNDYINAIISKLEEYKLYDNYKKDESSIQTAIFRLEDMLQFRKN
IITLHYNPINDIREHCINIIPMEELDENAVDIVVSYIAKAVLDDRKKIIINKGRNFAKPV
FMIFEEAHLIAPQHRKTRAKYYLSRIAREGRKFGVGLCLVSQRPKTLDAETLSQCSNLII
SKLIEPTDQKHVQMASENLSEDLIKQLTSLNIGEAIILGPCIKVPAIVKVDRFDGRYGGE
DLDIVKLWGESFEEETDDDFEDRIFDEDDW
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattgtatggataaggttattggatacacaataggagagacaaggatagatgaa
ctgacatttttggcgagagaggccccaaaagttggcgactatgtaaaaataaaatatgac
ggatctgaattacttggtatggtggaaagcacaattcaaggaaatcttgcattagaagat
atattaaacatagatcatttagaaaaaataagaaagtttgaagataactcatcatactat
atacttgggaaaataaaagttttaggagatgtaaaagacctaaatgaagaaaaggcgctt
aaacttccaagagttcctccaaaaccaggaataccaatatatttggctgaaaatgatctt
ttaaaagaggtttttggtaaaggacacttgaaaattggccatttagttacaagaaacgat
gtagatgtaaaattagatgcaaataaactatgttcaagacatttggctatattggcaatg
acaggaatgggaaaatcaaacacagtagctgttttactaagggaattaaataaacttaaa
gcaacggtcttagtttttgacatgcatggggagtatagagatatttactgtgagagtgaa
gatttgagaaaacacattattgaaccgaaaataaacatttataaaattggagatgaagat
ctatgcgatcttgcaggagtagatgctcaggcaacaaaacaaaggccatatataagaaaa
gccattaaagaaatcaaagaaaatcatagagagagtgattttagcactgtaaatgattat
ataaatgcaataatctcgaaattggaggagtataagttgtatgacaattataagaaagat
gagagtagtatacaaaccgcaatatttagattggaggatatgctacaatttagaaaaaat
ataataaccctccactacaacccaataaacgacataagagaacattgcataaatatcata
ccaatggaggagttagatgagaatgctgttgatattgtagtttcttacattgcaaaggca
gttttagacgatagaaaaaaaatcatcataaacaagggacgaaactttgctaagccagtg
tttatgatcttcgaagaggcacatttgatcgctcctcaacatagaaaaacaagggcaaaa
tattatttgagtagaatagcaagagagggaagaaaatttggggttgggttgtgtttggtc
tcccaaaggccaaaaacgctcgatgctgaaacattatctcaatgttctaatctaataatc
tctaaactcattgagccaacagatcagaagcatgtccaaatggcttcggagaatttaagc
gaagatttaattaaacaattaacaagtttgaatattggagaagcgataattttaggccct
tgtattaaagttcctgctattgttaaagttgatagatttgatggaaggtatggaggagag
gatcttgacattgtaaagttgtggggagagagttttgaggaagaaacagatgatgatttt
gaagatcgcatctttgatgaagatgattggtag
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