Methanocaldococcus vulcanius: Metvu_1206
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Entry
Metvu_1206 CDS
T01105
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mvu
Methanocaldococcus vulcanius
Pathway
mvu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Metvu_1206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvu03019
]
Metvu_1206
03009 Ribosome biogenesis [BR:
mvu03009
]
Metvu_1206
04131 Membrane trafficking [BR:
mvu04131
]
Metvu_1206
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvu04147
]
Metvu_1206
Messenger RNA biogenesis [BR:
mvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Metvu_1206
Ribosome biogenesis [BR:
mvu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Metvu_1206
Membrane trafficking [BR:
mvu04131
]
SNARE
SNARE associated proteins
Others
Metvu_1206
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Metvu_1206
Exosome [BR:
mvu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Metvu_1206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_2
TIP49
AAA_33
AAA_14
AAA_22
Vps4_C
AAA_28
nSTAND3
DUF815
IstB_IS21
Mg_chelatase
AAA_18
Sigma54_activat
AAA_7
RNA_helicase
PhoH
ABC_tran
AAA_17
Zeta_toxin
TsaE
AAA_3
AAA_24
AAA_lid_PRS2_C
Sigma54_activ_2
Parvo_NS1
ATP-synt_ab
AAA_30
bpMoxR
SLFN-g3_helicase
NB-ARC
ResIII
Baculo_PEP_C
ATPase
COG5_C
DUF6674
Molydop_binding
DUF4919
Glutaredoxin2_C
RIN1
Allexi_40kDa
DUF2203
AHD
Motif
Other DBs
NCBI-ProteinID:
ACX73064
UniProt:
C9RHL2
LinkDB
All DBs
Position
1190419..1193130
Genome browser
AA seq
903 aa
AA seq
DB search
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGAKGKAYAIVYRGFLEDAG
KGIIRIDGYLRQNAGVAIGDKVKVKKVDIKEAKKVVLAPTQPIRFGPGFEDFVKRKIMGQ
VLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTEFTHVELKEEPVSEVKETKVPDVTYED
IGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDELDAIAPKRDEASGEVERRLV
AQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHT
RNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNL
KVTMDDFKEALKEVEPSAMREVLVEVPNIKWEDIGGLEDVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRK
ARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVIVIAATNRPD
IIDSALLRPGRLDRVILVPVPDEKARLDILKIHTRSMNLDEDVNLEELAKKTEGYTGADI
EALCREAAMLAVREGIGKPWEIEVKLRDLINYLQSISGTFRGAAVELNSIIKATKERETA
ESGEFSELKNAIGRIISVLAPAKEKIEAVEKEVDNFLEIINKEELKPSEKDEAQKLAKYL
KDILNKLKEMIDNIYELENKLNTLKDQVSAEEIDEIIKTTQNILQRFTTSLDELKNILKD
IESIRLKVSTKDVKIKKEHFLKALEKIKPSVSKEDMRIYEKLAQEYGRSTSTEKKKEENK
EVI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaattaaaagttgccgaagcatatcaaggagatgtaggaagaggaattgcg
agaatagacccatacacaatggaagaacttggtttaaaaccaggagatgttatcgaaatt
gaaggggctaagggaaaggcctatgctattgtttataggggcttcttagaagatgctggg
aaaggaatcataaggattgatggttatttaagacaaaatgctggagtggcaataggagat
aaagtaaaagttaaaaaagtagatataaaagaagcaaagaaagttgtattagccccaact
caaccaattagattcggacctggatttgaggacttcgtcaagagaaagataatggggcaa
gttttaagcaaaggttcaaaagtcactattggggtcttaggaactgctttaacatttgta
gttgttagcacaacaccagcaggccctgttagagtaacggaattcacacacgttgagtta
aaagaagaaccagttagcgaagttaaagaaaccaaagttccagacgttacctatgaagat
attggtggtttgaaagaggaggttaagaaagttagagaaatgatagaactaccaatgaga
cacccagagttgttcgaaaagttgggaattgaaccaccaaaaggagttttattagtggga
ccaccaggaactggtaaaacattattagctaaggcagtagctaacgaagcaggagcaaac
ttctatgttataaacggcccagagataatgagtaaatatgttggagaaacagaagaaaat
ctaagaaaaatatttgaagaggcagaagagaacgctccttcaatcatattcatagacgaa
cttgatgctatcgctccaaagagagatgaggcctctggagaagttgaaagaagattagtt
gctcaactcttaaccttaatggatggattgaaaggaagaggacaagttgttgttattggt
gcaacaaacagaccaaacgcattagaccctgcattaagaagacctggaagatttgataga
gagattgttatcggagtgccagacagagaaggaagaaaagagatcttacaaatacacaca
agaaacatgccattagcagaggacgttgacctcgattatttagctgatgtaacccacgga
ttcgttggggctgatttagcagctttatgtaaagaggcagcaatgagagctttaagaagg
gtcttaccaagcattgacttagaggcagaagaaattccaaaagaggttttggataactta
aaagttacaatggatgacttcaaagaggcattgaaagaagttgagccatcagcaatgagg
gaagttttagttgaagttccaaatatcaaatgggaggatattggtggcttagaagatgtt
aaacaggaattaagagaggcagtcgaatggccattgaaggcaaaagaggtctttgagaaa
attggtgtaagacctccaaaaggtgtattgttgtttggaccaccaggaacaggtaagacg
ttattggctaaggcagtagctaacgaaagcggagcaaacttcataagcgttaaggggcca
gagatatttagtaagtgggtaggggaaagtgagaaggcaataagagagatattcagaaag
gcaagacagtcagcaccctgtataatattcttcgatgagattgatgctattgctccaaag
agaggaagagatttaagttcagcagttactgataaagttgtcaaccagctattaactgaa
ttggatggaatggaggaaccaaaggatgttatagttattgcagcaactaacagacctgat
ataatcgattcagctctactaagacctggaagattagatagagttatattagttccagtt
ccagacgagaaagcaagattagatatattgaagatacacacaagaagcatgaatttagat
gaggatgttaacttagaagagttggctaaaaagacggagggttatacaggagctgatatt
gaagcgttatgtagagaggcagcaatgttggcagttagagagggaataggaaaaccatgg
gagatcgaagtaaaacttagagatttaattaactacttgcagagtatttcaggaacattt
agaggagcagcagtggaacttaacagcataataaaagctactaaggaaagagaaacagca
gagtcaggagaattcagcgaattgaagaatgccataggaagaattataagtgtcttagca
cctgctaaggagaagattgaagcagtagagaaggaagttgataacttcttagagattata
aacaaggaagagttaaagccatctgaaaaagacgaagctcagaaattggctaaatacttg
aaagatattcttaataagttaaaagaaatgatagacaacatttacgagttggagaacaag
ttaaatactttgaaagatcaagtatcagctgaagagatcgatgagatcataaaaacaaca
cagaatatcctacaaagattcactacatccttagatgagctcaaaaacatattaaaagat
attgaaagtataagattaaaggtttcaacaaaagatgtcaaaatcaagaaagaacacttc
ttaaaagcccttgaaaagataaagccatctgtaagtaaagaagatatgagaatctatgaa
aagttagctcaagagtatggaagatctacatcaacagaaaagaaaaaagaggagaataaa
gaagtgatctaa
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