Methanocaldococcus vulcanius: Metvu_1400
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Entry
Metvu_1400 CDS
T01105
Name
(GenBank) translation elongation factor EF-1, subunit alpha
KO
K03231
elongation factor 1-alpha
Organism
mvu
Methanocaldococcus vulcanius
Pathway
mvu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mvu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Metvu_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvu03019
]
Metvu_1400
03016 Transfer RNA biogenesis [BR:
mvu03016
]
Metvu_1400
03012 Translation factors [BR:
mvu03012
]
Metvu_1400
04131 Membrane trafficking [BR:
mvu04131
]
Metvu_1400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvu04147
]
Metvu_1400
Messenger RNA biogenesis [BR:
mvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Metvu_1400
Transfer RNA biogenesis [BR:
mvu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Metvu_1400
Translation factors [BR:
mvu03012
]
Eukaryotic type
Elongation factors
Metvu_1400
Membrane trafficking [BR:
mvu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Metvu_1400
Exosome [BR:
mvu04147
]
Exosomal proteins
Proteins found in most exosomes
Metvu_1400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
RsgA_GTPase
Gtr1_RagA
Ras
FeoB_N
PduV-EutP
Roc
cobW
Motif
Other DBs
NCBI-ProteinID:
ACX73253
UniProt:
C9RI51
LinkDB
All DBs
Position
1405507..1406793
Genome browser
AA seq
428 aa
AA seq
DB search
MAKQKPVLNVAFIGHVDAGKSTTVGRLLYDSGAIDPQVLEKLKREAQERGKAGFEFAYVM
DNLKEERERGVTIDVAHKKFETPKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVDVND
AKTGLQPQTREHMFLARTLGIKQIAIAINKMDTVNYSQEEYEKMKKMLSDQLLKVLGYNP
DQIDFIPTASLKGDNVVKRSENMPWYKGPTLVEALDKFQPPEKPTNLPLRIPIQDVYSIT
GVGTVPVGRVETGILKPGDKVVFEPAGVQGEVKSIEMHHEQIPQAEPGDNIGFNVRGVSK
KDIKRGDVCGHPDNPPTVADEFTAQLVVLQHPTAITVGYTPVFHAHTAQVACTFMELLKK
LDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMA
IDVKAKNK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaaaaacctgtattaaacgtagcatttatcggacacgtcgatgcaggtaag
tcaacaacagtcggaagattgttatacgatagtggagctatcgacccacaggtattggag
aagttaaaaagagaagcacaagagagaggtaaagcaggattcgagtttgcttatgtcatg
gacaacttgaaagaagaaagagaaagaggagttacaattgatgtagctcacaagaaattc
gagacaccaaaatacgaagttacaatcgtcgactgtccaggacacagggacttcattaaa
aacatgattacaggagcttcacaggcagatgctgctgtcttagtcgttgatgttaacgat
gctaaaacaggattacaaccacaaacaagagaacacatgttcttagcaagaactctcgga
attaaacaaatcgctatcgcaattaacaagatggatacagttaattacagccaagaagaa
tacgaaaaaatgaaaaaaatgttatcagatcagttattaaaggtcttaggatacaaccct
gaccaaatcgactttatcccaacagcttcattaaaaggagataacgtcgttaaaagatca
gaaaacatgccttggtataaaggaccaacattagtcgaggcattagacaaattccaacca
ccagaaaaaccaacaaacttaccattaagaattccaatccaagatgtttactcaattaca
ggggttggaactgtcccagttggaagagtcgaaacaggtatcttaaaaccaggagataaa
gttgtattcgaaccagcaggagttcaaggagaagttaaatccattgagatgcaccacgag
caaatcccacaagcagaaccaggagacaacattggatttaacgttagaggagttagtaaa
aaagatattaagagaggagacgtttgtggacatccagacaatcctccaacagttgctgat
gagtttacagctcaactcgttgtcttacaacacccaacagcaattacagttggttataca
cctgtcttccacgcacacacagcacaagttgcctgtacatttatggagttgttgaagaaa
ttggatccaagaacagggcaagtcattgaagagaacccacagttcttaaagacaggtgat
gcagctatcgttaaaataaaaccaacaaaaccaatggttatcgaaaacgttagagaaatt
ccacagttaggaagattcgctatcagagatatgggtatgacaatcgctgcaggtatggca
atcgatgtcaaagctaagaataaataa
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