Microcystis viridis: myaer102_04980
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Entry
myaer102_04980 CDS
T06032
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mvz
Microcystis viridis
Pathway
mvz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
myaer102_04980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvz03019
]
myaer102_04980
03009 Ribosome biogenesis [BR:
mvz03009
]
myaer102_04980
Enzymes [BR:
mvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
myaer102_04980
Messenger RNA biogenesis [BR:
mvz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
myaer102_04980
Ribosome biogenesis [BR:
mvz03009
]
Prokaryotic type
rRNA helicases
myaer102_04980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BBH38018
UniProt:
A0A3G9JDS4
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All DBs
Position
538955..540394
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AA seq
479 aa
AA seq
DB search
MTTGFNNLGLSDSRLQHLETLGFTTPTEIQTKAIPLLLEGHDMVGMSQTGTGKTAAYSLP
LLERMDTKNPNVQALILTPTRELAQQVASAIKDFSDDRRLFILTVCGGQSMERQIRSLEK
GVQIVVGTPGRVIDLLDRKKLHLESLNWVVLDEADEMLSMGFIDDVKKILQASPSTRQTA
CFSATMPREIRDLIANFLKSPVSVTVSQPQAAPAKIEQKIYLIPRGWTKLKVLQPLLEIE
PLESAIIFVRTKQTAAELTCKLQEAGQTVDEYHGNLSQVQRERLVQRFREGKIKLVVATD
IAARGLDVENLSHVINYDLPDNAETYIHRIGRTGRAGKTGTAISLVEPIDRRLLRQIEQR
LRQRLESSPIPSRTEVEAKRLAKLQNQLKEALSGERMASFLPLVRDLSEEYDPQAIAAAA
LQMIYDQNCPQWMKTDWEVPAATSSKPVINKTPRSGGSKYPSKSNNRPSLDKKIVFQER
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccactggtttcaacaatttaggtttatccgatagccgtcttcaacacctagaaacg
cttggattcaccacccccaccgaaattcaaaccaaagccatccctctccttctagaaggg
catgacatggtaggaatgtcacaaacgggaaccggcaaaactgccgcctattccctgcct
ttactggaacgcatggacaccaaaaatcctaacgttcaagctttaatcctcacccccacc
cgggaattagcccaacaggtagccagcgccatcaaagatttctctgatgatcgtcgtctc
tttatcctgacagtctgtggtggtcaatccatggaacgtcagatccgcagtctggaaaaa
ggtgtccagattgtggtcgggactcccggccgggtaatcgatctgctcgatcgcaaaaaa
ctccatctagaatccctaaactgggtagtcctcgatgaagcggacgaaatgctcagtatg
ggttttatcgatgatgtgaagaaaattctgcaagcatccccctccacccgtcaaaccgcc
tgtttctcggcaactatgccccgggaaatccgcgatttaatcgctaatttcttgaaatct
cccgtttctgtgacggtttctcaaccccaggccgctcctgctaagattgagcagaaaatt
tatctgatccctcgcggttggacgaaattaaaagtcctgcaacccctgttagagatcgaa
cccctagaatcggcgattattttcgtccgcaccaagcaaaccgcggccgaattaacctgc
aaactgcaagaagcggggcaaacggtggatgaataccacggtaacttaagccaagtccaa
cgggaacgactggtgcaacgtttccgcgagggcaaaattaaattagtggtagccacagat
atcgcagcccgcggtctagatgtggaaaatctcagccacgttattaactatgatctgccg
gataatgccgaaacctatattcaccgcattggccgcaccggccgcgctggtaaaacagga
actgctatatccttagtagaaccgatcgatcggcgtttgttgcgtcagattgaacagcgt
ctgcgtcaacgtctggaatctagtcccattcctagccgcaccgaagtagaagcaaaacgc
ctggccaagctgcaaaatcagctaaaagaggctttatcgggggaacgtatggcttctttc
ttgcctttagtgcgggatttaagtgaagaatacgatccccaagcgatcgcggcggctgcc
ctgcaaatgatctacgatcaaaattgtccccagtggatgaaaaccgattgggaagttccc
gcagcgacgagcagtaaaccggtgattaataaaactccccgcagtggtggtagtaagtac
ccctctaagtcgaataaccgtccttccctggacaaaaaaattgtctttcaagaacgttaa
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