Microcystis viridis: myaer102_19220
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Entry
myaer102_19220 CDS
T06032
Symbol
sigD
Name
(GenBank) group 2 RNA polymerase sigma factor SigD
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mvz
Microcystis viridis
Brite
KEGG Orthology (KO) [BR:
mvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvz03021
]
myaer102_19220 (sigD)
Transcription machinery [BR:
mvz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
myaer102_19220 (sigD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_10
HTH_24
HTH_29
HTH_23
MerR
HTH_Mga
YdaS_toxin
MerR_1
HTH_71
Motif
Other DBs
NCBI-ProteinID:
BBH39390
UniProt:
A0A3G9K387
LinkDB
All DBs
Position
complement(2058340..2059296)
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AA seq
318 aa
AA seq
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MKTSKNPTDPVRAYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLRAKLGREPSDR
QWSEAAEISEEQLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQ
DKGRAATIAELAEELDLTPKQVRDYLERSRQPLSLDLKVGDNQDTELGELLEDTGLSPED
YTAYSSLQVDLEKLMADLTPQQKEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIERE
AIAKLRKRKGNIREYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcgaaaaaccccaccgatccagttcgcgcctatctcagagaaattggccga
gttccccttctcacccatgaagaagaaattctctacgcgaaacaggtgcaaagattaatt
tttctcgaaaaaatcaaggaatccctaagggcgaaactcggcagggaacccagcgatcgc
caatggtcagaagcggcggaaattagtgaagaacaactccgtcgagaattgggggcaggg
gatttcgccaaacgcaagatggtagaagcgaacctgcgtctagtggtttccgtcgctaaa
aaatacctaaaacgcaatctagatctattggaccttatccaagagggaacgattgggatg
caaagaggtgtggaaaaattcgatcccaccaaaggctatcgcttctccacctatgcttat
tggtggattcgccaagccatcaccagggcgatcgcagaaaaaagtcgcaccatccgtctg
cccatccacatcaccgaaaaactgaataaaatcaaaaaagcccagcgtcaactagctcaa
gataaaggtcgcgctgccaccattgccgaattagccgaggaattagacctaactcccaaa
caggtgcgagactacttggaaaggtcccgtcaacccctttcccttgacttaaaggtgggg
gacaatcaagacacggaattaggggaactcttggaagatacgggactttcccccgaagat
tacactgcctattcttccctccaagtggatttggaaaaactgatggcagacctcacccct
caacaaaaagaagtgatttgtctgcgttttggtttagataatgggcagcccctcacccta
gcaaaaattggcgttcgactcaatatcagtcgtgaacgcgtgcgtcagatcgaacgagaa
gcgatcgctaaattaagaaaacgcaagggcaacatcagagaatatctagctagttag
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