Microcystis viridis: myaer102_27010
Help
Entry
myaer102_27010 CDS
T06032
Name
(GenBank) RNA polymerase beta prime subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mvz
Microcystis viridis
Pathway
mvz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
myaer102_27010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvz03021
]
myaer102_27010
03400 DNA repair and recombination proteins [BR:
mvz03400
]
myaer102_27010
Enzymes [BR:
mvz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
myaer102_27010
Transcription machinery [BR:
mvz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
myaer102_27010
DNA repair and recombination proteins [BR:
mvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
myaer102_27010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Biotin_lipoyl
RPOC_hybrid
RPN1_C
DUF5694
Motif
Other DBs
NCBI-ProteinID:
BBH40149
UniProt:
A0A3G9JZI3
LinkDB
All DBs
Position
2890150..2894154
Genome browser
AA seq
1334 aa
AA seq
DB search
MFYNQTVDKGKLKKLIAWAYQNYGSARCSQMADELKNLGFRFATKAGVSISVDDLTVPPA
KRQMIESAEQEIRQTEQRYVRGEITEVERFQKVIDTWNSTSESLKDEVIRNFQVTDPLNS
VYMMAFSGARGNMSQVRQLVGMRGLMANPQGEIIDLPIKTNFREGLTVTEYVISSYGARK
GLVDTALRTADSGYLTRRLVDVSQDVIVREADCGTNRYVELTAMTDGDRVLIPLSDRLLG
RSLAEDVVVNGEVIATRNQIIDDETAEKLGKLVDKIKVRSPLTCEAARSVCQTCYGWSLA
HGHPVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVARQVRSPFEGSVRFLPGLS
IRNVRTRHGDERDQVEAPGEIKLTPKDKTKETVTYSLTPGSLLFVTDGATVSEEQLLAEI
TSDKVQKSTEKATKDVTSDLAGEVLFSQLVPEEKTDRQGNTTRIAQRGGLLWILSGEVYN
LPPGAEPVVSNGDQVQVGDVLAETKLVSTNGGLVRLAPNSREIDIVTASVSLDQAEVKVE
SSAGREQFIIHTGDGQRFLLKTTPGTKVQNHAIVAELIDDRYQTHTGGMIKYVDIEVAKG
SRKQGYEITKGGTILWIPEETHEVNKDISLLQVEDGQYVEAGEEVVKDIFCNSSGVVEVI
QKNDILREIIVKPGLLFMDLEPESSGIAQEQLIYPGTQLTPEVTIEELRQAEWVETNEGL
GLLLRPVQEFTVQDQSTSPTQGSANQEGGRHIELRSVQRIFFKDGERVKSVEGCQLISTQ
LVLEISSEEPESVSHLTADIELEPIEDRDCQRLQLVILESLVLRRDSDNDPLGGNIQTRV
LVQDGDEIPPGAVVARTEIQCKEAGEIRGIRKGSEAVRRLLIVSDRDEFILPLAVAPTVK
ARDLVIAEAEIAAGVLAPNSGQVLAVDKTATGYEIRLRKARPYRVSAGAILHIDEGDLVQ
RGDNLVLLVFERSKTGDIIQGLPRIEELLEARKPKEACVLARKPGVCQVEYQDSEIVDIK
VVEDDGTISEYPLLGSQNPLVSDNQRIDVGQALTDGQANPHEILEVFFNYYVDSLGSYEA
ALKALEKTQMFLVDQVQSVYQSQGIDIADKHIEVIVRQMTSKVRIDDGGDTSMLPGELLE
LRQVETVNEAMSITGGAAAKYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKS
DWLRGLKENVIIGRLIPAGTGFNSHENTAGISDYTPPEEEYNYNNRSYYAPPGGLGLPPR
PGFGDSSEDSDMILDDQTARAYAEGDVVDLEDDEMAFLSSRGSSRFSRQPISDSWSEADE
EGDEDDFEGDYEEE
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgttttataaccaaactgttgacaaaggaaaactgaaaaaactgatcgcttgggcctat
caaaactacggttcggcgcgctgttcacaaatggccgatgaattgaaaaacctcgggttt
cgtttcgctaccaaagcaggggtttccattagtgtggatgatttaaccgtaccgccggct
aaacgacagatgatcgaaagtgccgaacaggaaatccggcaaaccgaacagcgttatgtg
cgcggggaaatcaccgaagtggaacgcttccaaaaagtaattgacacttggaatagtaca
tctgaatcgcttaaagatgaagtaattcgcaacttccaagtcaccgatcccctcaactcc
gtctatatgatggctttctccggggcgcggggtaatatgagccaagtgcgtcagttagtg
ggaatgcggggattaatggctaatccccagggggaaattatcgacctcccgattaagact
aacttccgggaaggattgaccgttaccgaatacgttatttcctcctacggggcgcgcaaa
ggtttagttgatacagccctacggacggcagattccggttatttgactcgtcgtctcgtc
gatgtgtcccaagatgtcatcgtccgcgaggcagattgtggcactaatcgttatgttgaa
ttaaccgccatgaccgatggcgatcgcgtgttaattcccttaagcgatcgcctattaggt
cgttccttggccgaagatgtggtggtcaatggagaagtgatcgccacccgtaaccagatt
atcgatgacgaaaccgccgaaaaactgggcaaactggtcgataaaatcaaagtccgcagc
cccttaacctgtgaagcagcccgctcggtttgccaaacctgttacggttggagtctggcc
cacggtcatccggtagatatgggggaagcagtggggattattgccgcccaatcgatcggg
gaaccagggactcagttaaccatgcgtaccttccacaccgggggcgtatttaccggagaa
gtggcccggcaagtgcggagtcccttcgagggaagcgtgcgttttctgccgggtttaagt
atccgtaacgtgcgaactcgccacggagacgaacgggatcaggtggaggcaccgggggaa
attaaattaacacccaaggataaaactaaagaaactgtcacctactctttgactcctggt
tcgctgctattcgtcaccgatggggcaacagtaagtgaggaacagttactagcggaaatt
acctccgataaagtccaaaaatcgacagaaaaagccacaaaagacgtaaccagtgactta
gctggtgaggtgctattctcccaattagtgccagaagaaaaaaccgatcgccaaggcaat
accacccgcatcgcccaacgggggggattactatggattctctccggagaagtgtataac
ttgcccccaggagccgaacccgtggtcagtaacggcgatcaagtacaagtgggggatgtt
ctagcggagactaagttggtatccactaacggcggtttggtgcgtttagcccccaatagc
cgggaaatcgatatcgtcaccgcttccgtgtctttggatcaggccgaagtaaaagtagaa
agtagtgccggtcgggaacaatttattattcatacgggagatggtcaacgcttcctgctg
aaaaccactccggggacaaaagtacagaatcatgccattgtcgccgagttaatcgacgat
cgctatcaaacccacaccggtggcatgattaaatacgtcgatatcgaagtcgccaaaggc
agccgtaaacagggttatgaaattaccaaaggcggcacgatcctctggattcccgaagaa
acccacgaagttaataaagatatctccctcttacaggtggaagatgggcagtatgtggaa
gcaggggaagaagtggttaaagacatcttctgtaactctagcggtgtggtggaagtcatc
cagaaaaatgacatcctccgggagatcattgtcaaaccggggctgttatttatggatctc
gaaccggaatcctccggaattgcccaagaacagttaatttaccccgggacacagttaacc
cccgaagtcacgatcgaggagttacggcaagcggaatgggtggaaactaacgagggtttg
ggtttactactgcgaccggtacaggagttcactgtacaagaccaatccacttctcccacc
caaggttccgctaaccaagaaggaggacgacatatcgaactgcgatcggtgcagcgcatc
ttctttaaagacggtgaaagagttaaatccgtcgagggttgtcaactgatcagcacccaa
ttagtcctcgaaatttccagcgaagaaccagaatcagtctcccatctgacggccgatatc
gagttagaaccgattgaggacagggattgtcagcgtttacagttagttattctcgaatct
ctggtgctgcgtcgggatagtgataatgatcctttaggcggtaatattcagactcgcgtt
ctcgtccaagatggcgatgaaattccaccgggggcagtggtggccagaaccgaaatccag
tgtaaggaagctggagaaattcgcgggattcgcaagggcagcgaagcggtgcgccgtctt
ttaattgtgagtgaccgtgacgagtttattctcccgctcgctgttgctcccaccgtcaag
gccagggatctggtaatcgccgaagctgagatcgctgccggagttttagcccccaattcc
ggtcaagtgctggccgttgacaaaaccgccactggctatgaaatccgtctgcgtaaggcc
cgaccctaccgagtatcggcgggggccattctgcacatcgacgagggagatctggtccaa
cggggcgataatttggtgctgttggtgtttgagcgctcgaaaaccggggatatcattcaa
ggtttaccgagaatcgaagaactgctcgaagcgcgtaaaccgaaagaggcctgtgtcctg
gcacgcaagccgggagtttgtcaagtggagtaccaagattctgagatcgtcgatattaag
gtggtcgaggatgacggcacgatcagtgaatatccgcttttaggcagtcaaaaccctctg
gtgagcgataatcagcgtattgatgtgggtcaggcgttaaccgatggtcaggctaatccc
cacgagattttagaggtgttctttaattattatgtggatagcctgggcagttacgaggca
gccctgaaagccttggaaaaaacccagatgttcctcgttgatcaggtacagtcggtttac
caatcccaagggatcgatattgccgataaacatattgaagtgatcgtgcgtcagatgacc
tctaaggtgcggatcgatgacggcggcgataccagtatgttacctggggaattgttggaa
ctgcgacaggtggagacggtaaacgaagccatgtcgatcaccggtggggcggcagctaaa
tatacgcctgtactactgggaatcaccaaagcttccttgaataccgatagctttatcagt
gccgcctccttccaagaaaccacccgcgtcctcacggaagcggcgatcgaaggcaagtcc
gactggttacggggtctcaaggaaaacgtgattatcggtcgtctgattccggcgggtact
ggcttcaattcccacgaaaacaccgcggggatcagtgattacacccccccagaggaggaa
tataactacaacaatcgtagctattacgctccccccggcggcctcggcttgcctcctcgt
cccggtttcggcgatagtagtgaggatagcgatatgattcttgacgatcaaaccgctcgc
gcctacgctgagggtgatgtggtcgatttagaggatgatgaaatggctttcctctcctcc
cgcggcagcagtcgctttagtcgccaacccatcagcgacagctggtcagaagccgatgag
gaaggggatgaggacgatttcgagggggattacgaagaagaataa
DBGET
integrated database retrieval system
