Microcystis viridis: myaer102_47640
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Entry
myaer102_47640 CDS
T06032
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mvz
Microcystis viridis
Brite
KEGG Orthology (KO) [BR:
mvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvz03016
]
myaer102_47640
Enzymes [BR:
mvz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
myaer102_47640
Transfer RNA biogenesis [BR:
mvz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
myaer102_47640
Prokaryotic type
tRNA splicing ligases
myaer102_47640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBH42122
UniProt:
A0A3G9JQE1
LinkDB
All DBs
Position
complement(5048273..5049454)
Genome browser
AA seq
393 aa
AA seq
DB search
MAYETLDISTPTPILSWAGHELGPQETQMAKNVASLPFVYKHISLMPDVHLGKGALVGSV
IATKDAVIPAAVGVDIGCGMAALKMPFTGEQLQGKLKKIRLDLEGNIPVGFAENKEVDRE
VTKWPKWAEFKQIHRGVQNLEKKALKQMGSLGGGNHFIEICLDTDNQVWLMLHSGSRGIG
NQLAQCHIDTAKELAKLAECKLPDLDLAYFVAGTEEFTAYWHDLQWAQEYARYNREIMMA
RFKRIVEKHLAGGKPTKPLLVVNCHHNYAEKEIHFGEEVYVTRKGAVRARETDYGIIPGS
MGAQSYIVKGKGEHNSFCSCSHGAGRLMSRNLAKKTFTLDDLIAQTQGVECRKDEGVIDE
IPGAYKPIQQVMNQQADLVEIVATLKQVLCVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcttacgaaactctggatatttccacaccgacaccgattttatcttgggcggggcat
gaattaggaccccaagaaacccaaatggccaaaaatgtcgcttccctaccttttgtttat
aaacacatttctttaatgcccgatgttcacttgggtaaaggcgctttagtcggttcggtg
attgccaccaaagatgccgtaattcccgccgccgtcggagtcgatatcggttgcggcatg
gctgccctaaaaatgccttttactggcgaacaattgcagggaaaactcaaaaaaattcgc
ctcgatttggaagggaatattcccgtcggttttgcggaaaataaagaagtagatcgggaa
gtgactaaatggccaaaatgggcggaatttaaacagattcatcgaggcgtgcagaaccta
gagaaaaaagcccttaaacaaatgggttctctggggggtggtaatcactttatcgaaatt
tgtttagatacagacaatcaagtttggttaatgctccattccggttctagaggtattggt
aatcaactggcccaatgtcatattgatacggccaaagagttagcaaaactagcagaatgt
aaattacctgacctcgatctggcctactttgttgccggtacagaagaatttaccgcctac
tggcacgatctacaatgggcgcaggaatatgcccgttataatcgggaaattatgatggct
agatttaaacgcattgttgaaaaacatctagcgggaggtaaaccaactaaacccctctta
gtagttaattgtcatcacaattatgccgaaaaagaaattcattttggtgaggaagtttat
gtcacccgcaaaggagccgtccgcgccagagaaaccgattatggtattatccccggttcc
atgggagcgcaatcttatattgttaagggcaaaggagaacataatagcttctgttcctgt
tcccacggggccgggcgcttgatgtcgagaaatctggctaaaaaaacctttactcttgat
gatttaattgcccaaacccaaggggttgaatgccgcaaagatgagggcgttattgatgag
attccgggagcttataaaccgatccaacaggtgatgaatcaacaggcggatctagtggaa
attgtcgccactctcaagcaggtgctgtgtgtcaaaggttaa
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