Microbacterium wangchenii: E4K62_05650
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Entry
E4K62_05650 CDS
T06490
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mwa
Microbacterium wangchenii
Pathway
mwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4K62_05650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mwa03021
]
E4K62_05650
03019 Messenger RNA biogenesis [BR:
mwa03019
]
E4K62_05650
Transcription machinery [BR:
mwa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E4K62_05650
Messenger RNA biogenesis [BR:
mwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E4K62_05650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
Spore_III_AA
NACHT
PIP5K
AAA_22
VWA_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
QBR88223
UniProt:
A0ABX5SQ07
LinkDB
All DBs
Position
1207058..1209145
Genome browser
AA seq
695 aa
AA seq
DB search
MESISEIQGVDASSNDAANTEDTVSAAAETFDTAAQPAAAEAAGQDAPAEEVAADAVDAT
PVDEAPAAVAETAPAEAAPAAEAAPAEEAPATEKPAKAPRKRAPRRAKSTDVPAEAPAAE
TAPADAAEAPAAEAPAAEPAAEAPVAAEAPAPTTDAPAPEASSAPAEAPVAEGTRARGGR
RRASAEPAAESAEPAAEPQAAADTAQPTAEAGSNDDSGEEGSSSGRNRNRNRNRNRNRGG
GGEGDKQPEKQQNERQQPERPQPEKQQPADDADQQGGGRNRQRNKRRGGQTPTDEFDTEI
TEDDVLIPIAGILDVLDNYAFVRTTGYLPGPSDVYVSLGQVKKYNLRKGDAVVGAIKQPR
EGEQSGRQKYNALVKVDAINGLSIEDAATRVEFGNLTPLYAQDRLRLETAPEKLTQRIID
LVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIAQNNPEVHLMVVLVDERPEEVTDMQRTV
RGEVVASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGR
VLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDDVIFEEFKGTGNSEL
RLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDTQQALEVVLGKL
KETQSNVEFLVQMQKSIPAPAHGAGGAHGHDNSIR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccagggtgtcgacgcgtcttcgaacgacgcggcgaacacc
gaagacaccgtctccgctgcggccgagaccttcgacaccgccgcgcagcccgctgccgcg
gaggctgccggccaggacgcgccggccgaggaggtcgccgccgacgcggtggacgccact
ccggtcgacgaggcgcccgccgccgtcgcggagaccgcgcccgctgaggcggcgcccgcc
gctgaggccgcgcccgccgaggaggcgccggcgaccgagaagcccgcgaaggccccgcgc
aagcgcgcgccgcgccgtgccaagagcaccgacgtccccgccgaggcgcccgccgcagag
acagcacccgccgacgcggccgaggcacccgccgccgaggcgcccgccgccgagccggcc
gccgaggcacccgtcgccgccgaagcccccgctcccaccaccgacgcaccggctcccgag
gcgtcctccgctccggcggaggctccggtcgccgagggcacgcgcgccaggggcggacgc
cgtcgcgcgtctgccgagccggcggcggagtccgccgagccggcagccgagccgcaggcc
gctgccgacaccgcgcagcccaccgccgaggcggggtcgaacgacgactccggcgaggag
ggctcgtcgtccgggcgcaaccggaaccgcaaccgcaaccgcaaccgcaaccgcgggggc
ggcggcgagggcgacaagcagcccgagaagcagcagaacgagcgtcagcagcccgagcgc
ccgcagccggagaagcagcagccggcggacgacgccgatcagcagggcggcggccgcaac
cgtcagcgcaacaagcgccgcggcggtcagacccccaccgacgagttcgacaccgagatc
accgaggacgacgtcctcatcccgatcgccggcatcctcgacgtgctcgacaactacgcg
ttcgtgcgcaccaccggttacctgccggggccgagcgatgtctacgtctcgctcggacag
gtcaagaagtacaacctgcgcaagggtgacgccgtcgtcggcgccatcaagcaaccgcgc
gagggcgagcagtccggccggcagaagtacaacgcgctggtcaaggtcgacgcgatcaac
ggcctgtcgatcgaggacgccgccacccgcgtggagttcggcaacctgacgccgctgtac
gcgcaggaccgcctccgcctggagacggccccggagaagctgacgcagcgcatcatcgac
ctggtcgccccgatcggcaagggtcagcgcggcctcatcgtcgccccgcccaaggccggc
aagacgatcgtcctgcagcagatcgccaacgccatcgcgcagaacaaccccgaggtccac
ctcatggtggtcctcgtcgacgagcgtccggaggaggtcaccgacatgcagcgcaccgtg
cgcggcgaggtcgtggcatccaccttcgaccgcccggccgaagaccacaccacggtcgcc
gaactcgcgatcgagcgcgccaagcgcctggtcgagctcggccgcgacgtcgtcgtactg
ctggactcgatcacgcgcctgggccgtgcctacaacatctcggcgccgacctcgggccgt
gtgctcaccggtggcgtggacgcatccgcgctctacccgcccaagcgcttcttcggtgct
gcgcgcaacatcgagaacggcggatcgctcacgatcctggcgacggcgctcgtggagacc
gggtccaagatggacgacgtcatcttcgaggagttcaagggcaccggcaacagcgagctg
cgcctgagccgccagctggcggacaagcgcatcttccccgcggtggatgtcaacgcctcc
agcacgcggcgcgaggagatgctcctctcgcccgatgaggtcaagatcacgtggaagctg
cgccgcgccctcgcgggcctggacactcagcaggcgttggaggtcgtcctcggcaagttg
aaggagacgcagtccaacgtcgagttcctcgtgcagatgcagaagtcgatcccggctccc
gcgcacggtgcgggcggcgcgcacgggcacgacaacagcatccgctga
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